RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 B4GALNT4Q76KP1 1039 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 HDAC7Q8WUI4 952 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 CAMKK2Q96RR4 588 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 PPP1R3GB7ZBB8 358 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 MEFVO15553 781 aaPredicted RBP20.5■□□□□ 0.87
CSK-201ENST00000220003 FSBPO95073 299 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 FKBP15Q5T1M5 1219 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 SH2D3CQ8N5H7 860 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 HAUS4Q9H6D7 363 aa20.5■□□□□ 0.87
CSK-201ENST00000220003 TDP2O95551 362 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 FLAD1Q8NFF5 587 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 RPGRIP1Q96KN7 1286 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 SPZ1Q9BXG8 430 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
CSK-201ENST00000220003 PCNTO95613 3336 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 TTLL1O95922 423 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 EEF2P13639 858 aaKnown RBP20.49■□□□□ 0.87
CSK-201ENST00000220003 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 PDXDC2PQ6P474 469 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 DTHD1Q6ZMT9 781 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 HPS3Q969F9 1004 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 ZMYND12Q9H0C1 365 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 STK32BQ9NY57 414 aa20.49■□□□□ 0.87
CSK-201ENST00000220003 ELF1P32519 619 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 TXKP42681 527 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 TNNI2P48788 182 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 COPB1P53618 953 aaKnown RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 NEDD9Q14511 834 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 KCTD16Q68DU8 428 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 RPAINQ86UA6 219 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 N4BP2L2Q92802 583 aaPredicted RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 HLA-DOAP06340 250 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 STAT6P42226 847 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 RNF187Q5TA31 235 aaPredicted RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 TMED8Q6PL24 325 aaPredicted RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 HHIPL2Q6UWX4 724 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 SH3RF1Q7Z6J0 888 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 KIAA1328Q86T90 577 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 TSEN2Q8NCE0 465 aaKnown RBP20.48■□□□□ 0.87
CSK-201ENST00000220003 CENPHQ9H3R5 247 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 JADE2Q9NQC1 790 aa20.48■□□□□ 0.87
CSK-201ENST00000220003 SLC37A4O43826 429 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 NAALADL2Q58DX5 795 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 ZDHHC15Q96MV8 337 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 RUFY1Q96T51 708 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 MCM8Q9UJA3 840 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L15C9J2P7 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L13C9JLJ4 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L11C9JVI0 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L18D6R9N7 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L22D6RA61 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L17D6RBQ6 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L19D6RCP7 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L20D6RJB6 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 CHUKO15111 745 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 OPA1O60313 960 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L24Q0WX57 530 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 RRAGBQ5VZM2 374 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 USP17L6PQ6QN14 398 aa20.47■□□□□ 0.87
CSK-201ENST00000220003 DMGDHQ9UI17 866 aaKnown RBP20.47■□□□□ 0.87
CSK-201ENST00000220003 TRIM49BA6NDI0 452 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 EDIL3O43854 480 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 SLC7A5Q01650 507 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 CERKLQ49MI3 558 aaPredicted RBP20.46■□□□□ 0.87
CSK-201ENST00000220003 STRIP1Q5VSL9 837 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 SH3GLB2Q9NR46 395 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 LIMA1Q9UHB6 759 aaKnown RBP20.46■□□□□ 0.87
CSK-201ENST00000220003 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 CCDC189A1A4V9 331 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 IDEP14735 1019 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 SKOR1P84550 965 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 UBXN1Q04323 297 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 ACTN3Q08043 901 aaPredicted RBP20.46■□□□□ 0.87
CSK-201ENST00000220003 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 REXO1Q8N1G1 1221 aaKnown RBP20.46■□□□□ 0.87
CSK-201ENST00000220003 LRRC1Q9BTT6 524 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 C6orf50Q9HD87 102 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 ATXN2Q99700 1313 aaKnown RBP20.46■□□□□ 0.87
CSK-201ENST00000220003 TTC26A0AVF1 554 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 MATR3P43243 847 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSK-201ENST00000220003 TRIM14Q14142 442 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 NONOQ15233 471 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSK-201ENST00000220003 CCDC70Q6NSX1 233 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 SIAH1Q8IUQ4 282 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 RIOX1Q9H6W3 641 aa20.46■□□□□ 0.87
CSK-201ENST00000220003 RCCD1A6NED2 376 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 NF2P35240 595 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 UBA7P41226 1012 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 LACRTQ9GZZ8 138 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 POTEMA6NI47 508 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 PES1O00541 588 aaKnown RBP20.45■□□□□ 0.86
CSK-201ENST00000220003 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
CSK-201ENST00000220003 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 DPEP1P16444 411 aa20.45■□□□□ 0.86
CSK-201ENST00000220003 TRAPPC10P48553 1259 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms