RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 PPFIA4O75335 1185 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
NME3-201ENST00000219302 MFSD10Q14728 455 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 KATNAL1Q9BW62 490 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 IL25Q9H293 177 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 CNNM2Q9H8M5 875 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
NME3-201ENST00000219302 MYH6P13533 1939 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 PALM3A6NDB9 673 aaPredicted RBP18.34■□□□□ 0.53
NME3-201ENST00000219302 GJB5O95377 273 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 MBTPS1Q14703 1052 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 HSDL1Q3SXM5 330 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 CELF3Q5SZQ8 465 aaKnown RBP18.34■□□□□ 0.53
NME3-201ENST00000219302 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
NME3-201ENST00000219302 ZNF618Q5T7W0 954 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 CYB5R4Q7L1T6 521 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 SAMD3Q8N6K7 520 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 RAD9AQ99638 391 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 UBAC1Q9BSL1 405 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 LMCD1Q9NZU5 365 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 MAD2L2Q9UI95 211 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
NME3-201ENST00000219302 BRWD1Q9NSI6 2320 aa18.33■□□□□ 0.53
NME3-201ENST00000219302 ZBTB5O15062 677 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 ZNF286BP0CG31 522 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 SP2Q02086 613 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 KCNV1Q6PIU1 500 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 HLA-CQ95604 372 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 ZBED2Q9BTP6 218 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 SUGCTQ9HAC7 445 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.52
NME3-201ENST00000219302 MYCLP12524 364 aaPredicted RBP18.32■□□□□ 0.52
NME3-201ENST00000219302 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
NME3-201ENST00000219302 ERVK-21P61565 698 aa18.32■□□□□ 0.52
NME3-201ENST00000219302 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
NME3-201ENST00000219302 IKBKEQ14164 716 aa18.32■□□□□ 0.52
NME3-201ENST00000219302 PGM5Q15124 567 aa18.32■□□□□ 0.52
NME3-201ENST00000219302 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
NME3-201ENST00000219302 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
NME3-201ENST00000219302 LINC01553A4QN01 128 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 EFCAB14O75071 495 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 TGFB3P10600 412 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 SERINC5Q86VE9 423 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.52
NME3-201ENST00000219302 SPATA33Q96N06 139 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
NME3-201ENST00000219302 SORBS3O60504 671 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 LGR5O75473 907 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 GGPS1O95749 300 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 UBA1P22314 1058 aaKnown RBP18.3■□□□□ 0.52
NME3-201ENST00000219302 HOXC8P31273 242 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.3■□□□□ 0.52
NME3-201ENST00000219302 GDPD5Q8WTR4 605 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 ZFP91Q96JP5 570 aaPredicted RBP18.3■□□□□ 0.52
NME3-201ENST00000219302 TGS1Q96RS0 853 aaKnown RBP18.3■□□□□ 0.52
NME3-201ENST00000219302 C1QTNF1Q9BXJ1 281 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
NME3-201ENST00000219302 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
NME3-201ENST00000219302 CYTH3O43739 400 aa18.29■□□□□ 0.52
NME3-201ENST00000219302 GRM4Q14833 912 aa18.29■□□□□ 0.52
NME3-201ENST00000219302 DBF4BQ8NFT6 615 aa18.29■□□□□ 0.52
NME3-201ENST00000219302 PIGSQ96S52 555 aa18.29■□□□□ 0.52
NME3-201ENST00000219302 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
NME3-201ENST00000219302 GCOM1H8Y6P7 765 aaPredicted RBP18.28■□□□□ 0.52
NME3-201ENST00000219302 POLR2MP0CAP2 368 aa18.28■□□□□ 0.52
NME3-201ENST00000219302 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
NME3-201ENST00000219302 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
NME3-201ENST00000219302 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.27■□□□□ 0.52
NME3-201ENST00000219302 RSPH10B2B2RC85 870 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 H3BRB1 525 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 CYP21A2P08686 494 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 RSPH10BP0C881 870 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 CCND2P30279 289 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 THPOP40225 353 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 MRPS9P82933 396 aaKnown RBP18.27■□□□□ 0.52
NME3-201ENST00000219302 HTRA4P83105 476 aaPredicted RBP18.27■□□□□ 0.52
NME3-201ENST00000219302 TROAPQ12815 778 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 TRAF1Q13077 416 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 PLEKHG4Q58EX7 1191 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 FAM117BQ6P1L5 589 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 TUT1Q9H6E5 874 aaKnown RBP18.27■□□□□ 0.52
NME3-201ENST00000219302 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 MTUS1Q9ULD2 1270 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 INSL6Q9Y581 213 aa18.27■□□□□ 0.52
NME3-201ENST00000219302 EMSYQ7Z589 1322 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 C17orf102A2RUQ5 167 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 ICAM3P32942 547 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 SP7Q8TDD2 431 aaPredicted RBP18.26■□□□□ 0.51
NME3-201ENST00000219302 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.51
NME3-201ENST00000219302 ATP6V0A1Q93050 837 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 OSBPL7Q9BZF2 842 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
NME3-201ENST00000219302 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms