RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 CTAGE9A4FU28 777 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 MARK3P27448 753 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 TMOD1P28289 359 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 TRPM4Q8TD43 1214 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 MMP19Q99542 508 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
CCDC113-201ENST00000219299 PPP1R18Q6NYC8 613 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 ATRIPQ8WXE1 791 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
CCDC113-201ENST00000219299 CETPP11597 493 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 GBP6Q6ZN66 633 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 HDXQ7Z353 690 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 NACC1Q96RE7 527 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 CBX8Q9HC52 389 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 CYLC1P35663 651 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 FKBP1CQ5VVH2 108 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 MYOCDQ8IZQ8 938 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 RNF169Q8NCN4 708 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 TBC1D5Q92609 795 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 KIF28PB7ZC32 967 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 ARL6IP4Q66PJ3 421 aaKnown RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 SYT10Q6XYQ8 523 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 NEK11Q8NG66 645 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 K7ENM7 598 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 FDPSP14324 419 aaKnown RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 PLCG1P19174 1290 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 SEC23AQ15436 765 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 C6orf163Q5TEZ5 329 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 NFKBIEO00221 500 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 SLFN14P0C7P3 912 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 PTPREP23469 700 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 CYP2J2P51589 502 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 RAPGEF1Q13905 1077 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 USP50Q70EL3 339 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 PIGOQ8TEQ8 1089 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 KCNB2Q92953 911 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 IL17RBQ9NRM6 502 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-201ENST00000219299 KCNG1Q9UIX4 513 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 PPP2R3BQ9Y5P8 575 aa10.37□□□□□ -0.75
CCDC113-201ENST00000219299 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 CTDNEP1O95476 244 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 RPN1P04843 607 aaKnown RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 APBB1IPQ7Z5R6 666 aaPredicted RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 GJA10Q969M2 543 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 PARK7Q99497 189 aaKnown RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 EVX2Q03828 476 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 CEP55Q53EZ4 464 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 ARFGAP2Q8N6H7 521 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 MAD2L2Q9UI95 211 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 CNTNAP5Q8WYK1 1306 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 ATP2C2O75185 946 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 CEP57Q86XR8 500 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 POLD4Q9HCU8 107 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 TAB2Q9NYJ8 693 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
CCDC113-201ENST00000219299 LONRF3Q496Y0 759 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 ANKRD13CQ8N6S4 541 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 GINM1Q9NU53 330 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 ZDHHC9Q9Y397 364 aa10.36□□□□□ -0.75
CCDC113-201ENST00000219299 INO80B-WBP1J3KQ70 363 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 PSAPP07602 524 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 DMP1Q13316 513 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 RASGRP2Q7LDG7 609 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 OPTNQ96CV9 577 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 INO80BQ9C086 356 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 LUC7L2Q9Y383 392 aaKnown RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 TMCO5BA8MYB1 307 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 VCAM1P19320 739 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 CYP2B6P20813 491 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms