RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 EPB41L5Q9HCM4 733 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 RPAP1Q9BWH6 1393 aaPredicted RBP14.72□□□□□ -0.05
SF3A1-201ENST00000215793 PLEKHG1Q9ULL1 1385 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 ECEL1O95672 775 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 BAG2O95816 211 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SGO2Q562F6 1265 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CCHCR1Q8TD31 782 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CHAMP1Q96JM3 812 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 EMILIN3Q9NT22 766 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 ECE1P42892 770 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 LRRC41Q15345 812 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 KCTD1Q719H9 257 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 LCORLQ8N3X6 602 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 STAG1Q8WVM7 1258 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CEP170P1Q96L14 293 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 ZSWIM5Q9P217 1185 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CDC37Q16543 378 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-201ENST00000215793 JADE1Q6IE81 842 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 MIS18BP1Q6P0N0 1132 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 RSPH3Q86UC2 560 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 FAM149B1Q96BN6 582 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 CLTAP09496 248 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 DIXDC1Q155Q3 683 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 KCTD16Q68DU8 428 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 ARMC9Q7Z3E5 817 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
SF3A1-201ENST00000215793 PARVGQ9HBI0 331 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 SEC31BQ9NQW1 1179 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 SERPINB2P05120 415 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 LIG3P49916 1009 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 STAT2P52630 851 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 LRRC63Q05C16 580 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 ALCAMQ13740 583 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 VSTM4Q8IW00 320 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 SDCCAG3Q96C92 435 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 NCAPGQ9BPX3 1015 aa14.71□□□□□ -0.05
SF3A1-201ENST00000215793 ESYT2A0FGR8 921 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 SAT1P21673 171 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 RFX1P22670 979 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 IFRD2Q12894 506 aaPredicted RBP14.71□□□□□ -0.06
SF3A1-201ENST00000215793 SUPT20HL1Q3ZLR7 823 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 MMEL1Q495T6 779 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 ARHGEF18Q6ZSZ5 1173 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.06
SF3A1-201ENST00000215793 PI4KBQ9UBF8 816 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.06
SF3A1-201ENST00000215793 MGEA5O60502 916 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 MXI1P50539 228 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 DPP9Q86TI2 863 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 TAB3Q8N5C8 712 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-201ENST00000215793 HDAC11Q96DB2 347 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 MCF2LO15068 1137 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 MED7O43513 233 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 PLTPP55058 493 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 SLMAPQ14BN4 828 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 TRIM56Q9BRZ2 755 aaKnown RBP14.7□□□□□ -0.06
SF3A1-201ENST00000215793 GCNT4Q9P109 453 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 PRKAB2O43741 272 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 LRRN2O75325 713 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 IFNAR2P48551 515 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 CCT5P48643 541 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.7□□□□□ -0.06
SF3A1-201ENST00000215793 PANX2Q96RD6 677 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 SERPING1P05155 500 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 RESTQ13127 1097 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 DGKHQ86XP1 1220 aa14.7□□□□□ -0.06
SF3A1-201ENST00000215793 YEATS2Q9ULM3 1422 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 SYNJ2BP-COX16A0A087WUM0 186 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 CLRN2A0PK11 232 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 ZNF233A6NK53 670 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 DNAJC24Q6P3W2 148 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 COX16Q9P0S2 106 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 LUC7L3O95232 432 aaKnown RBP14.69□□□□□ -0.06
SF3A1-201ENST00000215793 UBXN2AP68543 259 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 TMED8Q6PL24 325 aaPredicted RBP14.69□□□□□ -0.06
SF3A1-201ENST00000215793 FAM133AQ8N9E0 248 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 AKT3Q9Y243 479 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 COBLO75128 1261 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 SLC16A2P36021 539 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 ARL4AP40617 200 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 SURF1Q15526 300 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 SYDE2Q5VT97 1194 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 NBPF3Q9H094 633 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 SAMSN1Q9NSI8 373 aaKnown RBP14.69□□□□□ -0.06
SF3A1-201ENST00000215793 ATP8A1Q9Y2Q0 1164 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 ARHGEF37A1IGU5 675 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 TYW5A2RUC4 315 aaKnown RBP14.69□□□□□ -0.06
SF3A1-201ENST00000215793 CLIC2O15247 247 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 OPHN1O60890 802 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 NDUFA10O95299 355 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 TTC4O95801 387 aa14.69□□□□□ -0.06
SF3A1-201ENST00000215793 PLA2G4BP0C869 781 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms