RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 CFAP73A6NFT4 308 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 CHN1P15882 459 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 CALML3P27482 149 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 GBP1P32455 592 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 POLE2P56282 527 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 TRPM8Q7Z2W7 1104 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.65
CLDN18-201ENST00000183605 AGAP11Q8TF27 550 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 HPS3Q969F9 1004 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 TRIM7Q9C029 511 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 ECT2Q9H8V3 914 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 ETAA1Q9NY74 926 aa11.02□□□□□ -0.65
CLDN18-201ENST00000183605 KDM6AO15550 1401 aaPredicted RBP11.02□□□□□ -0.65
CLDN18-201ENST00000183605 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 ZNF844Q08AG5 666 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 KLHDC7AQ5VTJ3 777 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 PDXDC2PQ6P474 469 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 CABP7Q86V35 215 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 FAM228AQ86W67 206 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 C3orf20Q8ND61 904 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 TATDN2Q93075 761 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 LSM14BQ9BX40 385 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 PGRMC1O00264 195 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 UPP2O95045 317 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 HSPA9P38646 679 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 SNX1Q13596 522 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 C6orf89Q6UWU4 347 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 VPS36Q86VN1 386 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 VSIG1Q86XK7 387 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 STAG2Q8N3U4 1231 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 LPIN2Q92539 896 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 WNT7AO00755 349 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 DNAJC8O75937 253 aaPredicted RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 SUN1O94901 812 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 KRT18P05783 430 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 FCER1AP12319 257 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 ITGA6P23229 1130 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 PLTPP55058 493 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 ASIC2Q16515 512 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 CD302Q8IX05 232 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 MAGEC3Q8TD91 643 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 FMO2Q99518 471 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 TRIM4Q9C037 500 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
CLDN18-201ENST00000183605 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
CLDN18-201ENST00000183605 CCDC169A6NNP5 214 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 IGF2BP3O00425 579 aaKnown RBP eCLIP11□□□□□ -0.65
CLDN18-201ENST00000183605 ATP2A2P16615 1042 aaKnown RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 ERVK-9P63128 1117 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 ADCY2Q08462 1091 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 MAN2A1Q16706 1144 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 INF2Q27J81 1249 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 LETM2Q2VYF4 491 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 TCERG1LQ5VWI1 586 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 LRRC34Q8IZ02 419 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 PRCCQ92733 491 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
CLDN18-201ENST00000183605 PANK4Q9NVE7 773 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 BAZ2BQ9UIF8 2168 aaKnown RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 MST1RQ04912 1400 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 ORC4O43929 436 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 MGRN1O60291 552 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CALM1P0DP23 149 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CALM2P0DP24 149 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CALM3P0DP25 149 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 SLC5A1P13866 664 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 KLRC1P26715 233 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 CTCFP49711 727 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 SESN3P58005 492 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 STK4Q13043 487 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 PPP2R5BQ15173 497 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 TTI2Q6NXR4 508 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 ZNF662Q6ZS27 426 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 USP38Q8NB14 1042 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 PRMT1Q99873 361 aaKnown RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 MLXIPLQ9NP71 852 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 PTPRUQ92729 1446 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 GRID2IPA4D2P6 1211 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 H0Y3Z8 333 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 PRPF3O43395 683 aaKnown RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 GHRP10912 638 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 SCG2P13521 617 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 GNAT2P19087 354 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CCND1P24385 295 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CEBPAP49715 358 aaPredicted RBP11□□□□□ -0.65
CLDN18-201ENST00000183605 TSNAXIP1Q2TAA8 658 aa11□□□□□ -0.65
CLDN18-201ENST00000183605 CCDC38Q502W7 563 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms