RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 FAM133AQ8N9E0 248 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 PNMA1Q8ND90 353 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 TBC1D5Q92609 795 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 EPN3Q9H201 632 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 ANAPC4Q9UJX5 808 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 PCDHA4Q9UN74 947 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 ITGB4P16144 1822 aa6.44□□□□□ -1.38
CEACAM1-201ENST00000161559 UPP2O95045 317 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 TUBBP07437 444 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 RPSAP08865 295 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 HMGB2P26583 209 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 DSG3P32926 999 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 HSD17B3P37058 310 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 POLR2FP61218 127 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 TUBB4BP68371 445 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 DIXDC1Q155Q3 683 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 SWT1Q5T5J6 900 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 FNBP4Q8N3X1 1017 aaPredicted RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CELF1Q92879 486 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CABS1Q96KC9 395 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 SCLT1Q96NL6 688 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 UBA5Q9GZZ9 404 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 SLC40A1Q9NP59 571 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 GDF3Q9NR23 364 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 BLOC1S4Q9NUP1 217 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 MCM9Q9NXL9 1143 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 DDX20Q9UHI6 824 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 BCS1LQ9Y276 419 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 ANKRD36CQ5JPF3 1778 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 GRID2IPA4D2P6 1211 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 SMIM23A6NLE4 172 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 STXBP3O00186 592 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 EDIL3O43854 480 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 PPP1R12BO60237 982 aaPredicted RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 TDP2O95551 362 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 MCM3P25205 808 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 MDH1P40925 334 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 ACCSLQ4AC99 568 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 UHMK1Q8TAS1 419 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CAVIN3Q969G5 261 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 TBC1D31Q96DN5 1066 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 FAM84BQ96KN1 310 aaPredicted RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 RPGRIP1Q96KN7 1286 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 ERGIC2Q96RQ1 377 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CEP89Q96ST8 783 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 KLC4Q9NSK0 619 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 RBM28Q9NW13 759 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 AJAP1Q9UKB5 411 aaPredicted RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 SUFUQ9UMX1 484 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 LRP5O75197 1615 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 STRCP1A6NGW2 1772 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 MYH7BA7E2Y1 1941 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 KCNK3O14649 394 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 HGSO14964 777 aaPredicted RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 KIAA0754O94854 1291 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 EPB41P11171 864 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 GRB10Q13322 594 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 KCNB1Q14721 858 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 EMBQ6PCB8 327 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 KDM7AQ6ZMT4 941 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 LRRC55Q6ZSA7 311 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CACNA2D4Q7Z3S7 1137 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CCDC91Q7Z6B0 441 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 AMACRQ9UHK6 382 aa6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 NIP7Q9Y221 180 aaKnown RBP eCLIP6.43□□□□□ -1.38
CEACAM1-201ENST00000161559 CCDC88AQ3V6T2 1871 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 OPA1O60313 960 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 USO1O60763 962 aaKnown RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 DDAH1O94760 285 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 BMP15O95972 392 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 ZNF844Q08AG5 666 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 RAPGEF1Q13905 1077 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 LLGL1Q15334 1064 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 KIAA0753Q2KHM9 967 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 CCDC40Q4G0X9 1142 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 AADACL2Q6P093 401 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 GJB7Q6PEY0 223 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 TMED8Q6PL24 325 aaPredicted RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 ZNF572Q7Z3I7 529 aaPredicted RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 KSR1Q8IVT5 923 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 N4BP2L2Q92802 583 aaPredicted RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 ATP6V1G3Q96LB4 118 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 INPP4AQ96PE3 977 aaPredicted RBP6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 PNMA5Q96PV4 448 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 CARD10Q9BWT7 1032 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 DPH5Q9H2P9 285 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 LEMD3Q9Y2U8 911 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 H0YGN5 161 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 DAPK3O43293 454 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 FSBPO95073 299 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 SHBGP04278 402 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 PAX7P23759 505 aa6.42□□□□□ -1.38
CEACAM1-201ENST00000161559 IGHMBP2P38935 993 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms