RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CCDC77Q9BR77 488 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 FAF1Q9UNN5 650 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 FOXN1O15353 648 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 ASIC2Q16515 512 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 GALNT17Q6IS24 598 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 NOP53Q9NZM5 478 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 NUP98P52948 1817 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 TMEM110-MUSTN1A8MSY1 372 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 CEP104O60308 925 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 CTNNA1P35221 906 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 CORO7P57737 925 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 VPS52Q8N1B4 723 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 KLHL29Q96CT2 875 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 HOMER2Q9NSB8 354 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 PCDHA12Q9UN75 941 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 RREB1Q92766 1687 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 RWDD2BP57060 319 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 ZNF658Q5TYW1 1059 aaPredicted RBP13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 PANX2Q96RD6 677 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
TSPAN9-201ENST00000011898 H0YIN7 160 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 CTNNA2P26232 953 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 EEF1GP26641 437 aaKnown RBP13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 NCAPH2Q6IBW4 605 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC30A9Q6PML9 568 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 CNOT6LQ96LI5 555 aaKnown RBP13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 CHMP2AO43633 222 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 IQCDQ96DY2 449 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 BICD1Q96G01 975 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.28
TSPAN9-201ENST00000011898 STAMBPO95630 424 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 GTF2IP78347 998 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 FAM133BQ5BKY9 247 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 CCDC197Q8NCU1 140 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 MTRF1LQ9UGC7 380 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 GSG1L2A8MUP6 293 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 DESP17661 470 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 CCZ1BP86790 482 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 KRT31Q15323 416 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 RPS6KA1Q15418 735 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 DPF2Q92785 391 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 SCOCQ9UIL1 159 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.29
TSPAN9-201ENST00000011898 FRMPD2Q68DX3 1309 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 IFNAR2P48551 515 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 ALX1Q15699 326 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 KIRREL3Q8IZU9 778 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 RWDD2AQ9UIY3 292 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 BUB1O43683 1085 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TCP1P17987 556 aaKnown RBP13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 SH3BGRP55822 239 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TCP10Q12799 353 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TMCO4Q5TGY1 634 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TMC4Q7Z404 712 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 USP37Q86T82 979 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 PPP1R14CQ8TAE6 165 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TBC1D22AQ8WUA7 517 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 SEMA3EO15041 775 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TM4SF1P30408 202 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
TSPAN9-201ENST00000011898 AP5Z1O43299 807 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 MFAP3LO75121 409 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 FLOT1O75955 427 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PDHA1P08559 390 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms