RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Cst8P32766 142 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 NfibP97863 570 aaKnown RBP13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Dusp9Q7TNL7 452 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Clec16aQ80U30 1036 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Gprc5cQ8K3J9 440 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ifih1Q8R5F7 1025 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 RnpepQ8VCT3 650 aaKnown RBP13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Usp26Q99MX1 835 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Snrnp35Q9D384 244 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Wdr64Q9D565 1086 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Capn10Q9ESK3 666 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Lypla2Q9WTL7 231 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fxr2Q9WVR4 673 aaKnown RBP13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 PhipQ8VDD9 1821 aaKnown RBP13.96□□□□□ -0.18
Trim50-202ENSMUST00000111180 Nfx1B1AY10 1114 aaKnown RBP13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gm5134E9QAB5 671 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Esr2O08537 530 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Krt18P05784 423 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 PtmaP26350 111 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 PtpreP49446 699 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Csf2raQ00941 388 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Esyt3Q5DTI8 891 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Madcam1Q61826 405 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 C2cd5Q7TPS5 1016 aaKnown RBP13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cep120Q7TSG1 988 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cracr2bQ80ZJ8 394 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Smoc2Q8CD91 447 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Acat1Q8QZT1 424 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Dnajc19Q9CQV7 116 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 4933402E13RikQ9D4D2 429 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Polr2dQ9D7M8 142 aaKnown RBP13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 SetQ9EQU5 289 aaKnown RBP13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 GraspQ9JJA9 392 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Nap1l5Q9JJF0 156 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 Scnn1bQ9WU38 638 aa13.95□□□□□ -0.18
Trim50-202ENSMUST00000111180 A0A1L1SQF0 893 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Acad12D3Z7X0 555 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Zfp51Q3U4L8 781 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gas2l3Q3UWW6 683 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gpbp1Q6NXH3 473 aaKnown RBP13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Mtss1lQ6P9S0 715 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gga3Q8BMI3 718 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Kcnv2Q8CFS6 562 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Mettl5Q8K1A0 209 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ankrd54Q91WK7 299 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 F11Q91Y47 624 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ddx50Q99MJ9 734 aaKnown RBP13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Brms1Q99N20 246 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pabpc6Q9D4E6 643 aaKnown RBP13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Slc26a4Q9R155 780 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Stxbp4Q9WV89 557 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 JcadQ5DTX6 1320 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 SrcapA0A087WQ44 3271 aa13.94□□□□□ -0.18
Trim50-202ENSMUST00000111180 Serpina16D3Z660 418 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Fam184aE9PW83 1143 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Mroh8E9PYI4 1049 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Lpar1P61793 364 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 PomkQ3TUA9 349 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pex1Q5BL07 1284 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pnma5Q5DTT8 618 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Znf652Q5DU09 608 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ccna1Q61456 421 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pramel7Q810Y8 479 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Fbxo18Q8K2I9 1042 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Irx5Q9JKQ4 484 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Tfr2Q9JKX3 798 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Vav3Q9R0C8 847 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ttc6G3UYY4 1857 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pdzrn4E9PUZ9 1014 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Sept4P28661 478 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Tyro3P55144 880 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Rps6P62754 249 aaKnown RBP13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Erbb2P70424 1256 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Muc1Q02496 630 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Tff2Q03404 129 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ccdc33Q3ULW6 985 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Usp49Q6P9L4 685 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ctdspl2Q8BG15 465 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Iws1Q8C1D8 766 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ttc27Q8CD92 847 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Slc12a8Q8VI23 705 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pcdhb15Q91Y04 786 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cabp7Q91ZM8 215 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Krt82Q99M74 516 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ftsj3Q9DBE9 838 aaKnown RBP13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Dusp10Q9ESS0 483 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Sertad1Q9JL10 236 aa13.93□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cntnap5cQ0V8T7 1305 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pramef17A2ASJ1 475 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Kansl3A2RSY1 903 aaKnown RBP13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gm10134F6ZQC6 126 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Vmn2r71L7N2D8 855 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Stx1aO35526 288 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pcif1P59114 706 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Lrrfip1Q3UZ39 729 aaKnown RBP13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Nlrp2Q4PLS0 1046 aaKnown RBP13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cdc14aQ6GQT0 603 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Znf687Q9D2D7 1237 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 NapaQ9DB05 295 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Extl2Q9ES89 330 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms