RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ddx19bQ8BZY3 494 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Kcnk13Q8R1P5 405 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Ushbp1Q8R370 680 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Eps8l1Q8R5F8 716 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Usp26Q99MX1 835 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Nudt12Q9DCN1 462 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Pik3r1P26450 724 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 4933427I04RikQ3V053 235 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Ppp2r5cQ60996 524 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Trpc6Q61143 930 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Asic1Q6NXK8 526 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Slc17a8Q8BFU8 601 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Thap3Q8BJ25 218 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Ccdc38Q8CDN8 563 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Bpifb4A2BGH0 617 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Gm38392E9Q2A2 434 aa23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Enox1Q8BHR2 643 aaKnown RBP23.67■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Tdo2P48776 406 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Rit2P70425 217 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Eepd1Q3TGW2 569 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Anks1bQ8BIZ1 1259 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Erich6bQ9D4S6 220 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Kcnh7Q9ER47 1195 aa23.66■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Cul4bA2A432 970 aaKnown RBP23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Ccdc78D3Z5T1 437 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Nek1P51954 1203 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Nol4P60954 483 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Rbm12b2Q66JV4 834 aaKnown RBP23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Adck2Q6NSR3 617 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Pgm5Q8BZF8 567 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 IrgqQ8VIM9 583 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Kremen1Q99N43 473 aa23.65■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Gm973E9Q295 1059 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 SfnO70456 248 aaKnown RBP23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Cyp2b10P12791 500 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 EzrP26040 586 aaKnown RBP23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Dph1Q5NCQ5 438 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Atg4cQ811C2 458 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Entpd3Q8BFW6 529 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Tab2Q99K90 693 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 BcamQ9R069 622 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 PfasQ5SUR0 1337 aa23.64■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Zdbf2Q5SS00 2493 aaKnown RBP23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Pgap3A2A559 320 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gjd2O54851 321 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Foxd1Q61345 456 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ttc8Q8VD72 515 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Rhobtb2Q91V93 728 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Phf14Q9D4H9 881 aa23.64■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Kmt2eQ3UG20 1868 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gm10436L7N1Y3 520 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Hoxc13P50207 328 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 KhsrpQ3U0V1 748 aaKnown RBP23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Cyp4f37Q3V1F1 546 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Fkbp3Q62446 224 aaKnown RBP23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Tfe3Q64092 572 aaKnown RBP23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Sval3Q76I99 144 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 PicalmQ7M6Y3 660 aaKnown RBP23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Nemp2Q8CB65 421 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Slc25a38Q91XD8 326 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Cbx6Q9DBY5 414 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Git2Q9JLQ2 708 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Prl2c5Q9JLV9 222 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Cnpy2Q9QXT0 182 aa23.63■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 LtkP08923 888 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Pbxip1Q3TVI8 727 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Trak2Q6P9N8 913 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ankk1Q8BZ25 745 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Elp3Q9CZX0 547 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Mss51Q9D5Z5 446 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Nek3Q9R0A5 511 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gcnt4E9Q649 455 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Adamts10P58459 1104 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 GclcP97494 637 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ssrp1Q08943 708 aaKnown RBP23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gm10392Q3V3I3 114 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Sdccag8Q80UF4 717 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Med24Q99K74 987 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Dhx30Q99PU8 1217 aaKnown RBP23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Efhd1Q9D4J1 240 aa23.62■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Pak1O88643 545 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Pla2g4bP0C871 782 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 PpardP35396 440 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Stim1P70302 685 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 YdjcQ14BV6 310 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gpd2Q64521 727 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Tmc3Q7TQ69 1130 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Josd2Q9CR30 188 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Katnbl1Q9CWJ3 299 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ddah1Q9CWS0 285 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Uchl5Q9WUP7 329 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Magi2Q9WVQ1 1275 aa23.61■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Celf5D3Z4T1 395 aaKnown RBP23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Mrgprb1Q3UG61 350 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Btg1-ps1Q3V0S2 161 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Btg1-ps2Q3V0X0 161 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Epha7Q61772 998 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Tbc1d22bQ80VE5 505 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Slu7Q8BHJ9 585 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Igdcc3Q8BQC3 813 aa23.6■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms