RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Mphosph6Q9D1Q1 161 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ndst4Q9EQW8 872 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Magi2Q9WVQ1 1275 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 GsdmeQ9Z2D3 512 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 NpatQ8BMA5 1420 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Lrrc32G3XA59 663 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Lnx1O70263 728 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Syt2P46097 422 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ect2Q07139 913 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Llgl2Q3TJ91 1027 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Mei1Q9D4I2 1268 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 ErmardE9Q048 622 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gm6588E9Q3K0 461 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Adcy7P51829 1099 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Lrch1P62046 709 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Agap2Q3UHD9 1186 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Tom1l2Q5SRX1 507 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 AdalQ80SY6 360 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Palm2Q8BR92 376 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Stk39Q9Z1W9 556 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Krt36B1AQ75 473 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Serpina3iD3Z450 408 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Sult1d1Q3UZZ6 295 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ska2Q9CR46 120 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gstt4Q9D4P7 240 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cbx8Q9QXV1 362 aa15.08■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Adgrl2Q8JZZ7 1487 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Zbtb7aO88939 569 aaKnown RBP15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Ripor2Q80U16 1078 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 CcnyQ8BGU5 341 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Prdm11A2AGX3 565 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 FosP01101 380 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Sstr3P30935 428 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Stat5bP42232 786 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Krt80Q0VBK2 452 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Q80ZQ3 298 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Trim32Q8CH72 655 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Ccdc65Q8VHI7 493 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Grtp1Q9D3N8 359 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Slc8a3S4R2P9 928 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Tcof1O08784 1320 aaKnown RBP15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 JrklB2RRL2 523 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Hspa8P63017 646 aaKnown RBP15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Miga1Q4QQM5 600 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Ccdc84Q4VA36 332 aaKnown RBP15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Ccdc40Q8BI79 1192 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Ccdc159Q8C963 411 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Gnl3Q8CI11 538 aaKnown RBP15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 LrgukQ9D5S7 820 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 CoasyQ9DBL7 563 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 Nr2e3Q9QXZ7 395 aa15.08■□□□□ 0
Col3a1-201ENSMUST00000087883 AceP09470 1312 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Lig1P37913 916 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Dok7Q18PE0 504 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Tmtc1Q3UV71 942 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Krt34Q9D646 392 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Rhobtb1Q9DAK3 695 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Mmrn2A6H6E2 943 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Zbtb17Q60821 794 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Meis1Q60954 390 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Trpc6Q61143 930 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Ehd2Q8BH64 543 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Prpsap2Q8R574 369 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Rgs3Q9DC04 966 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Uhrf1bp1lA2RSJ4 1457 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Usp19Q3UJD6 1360 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Abcc2Q8VI47 1543 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 LtkP08923 888 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Pdha1P35486 390 aaKnown RBP15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Prmt9Q3U3W5 846 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Ddx31Q6NZQ2 687 aaKnown RBP15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Ddx19bQ8BZY3 494 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Vmn1r199Q8R280 367 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Tex9Q9D845 387 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Eno1P17182 434 aaKnown RBP15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Serpinb6Q60854 378 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Nde1Q9CZA6 344 aa15.07■□□□□ 0
Col3a1-201ENSMUST00000087883 Fam47cQ14BE7 430 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Cgref1Q8R1U2 281 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gpr108Q91WD0 569 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Nek8Q91ZR4 698 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 ArpinQ9D0A3 226 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Foxp4Q9DBY0 795 aaKnown RBP15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Trmt112Q9DCG9 125 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gm43738A0A0G2JEA5 862 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gfpt1P47856 697 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Kpna2P52293 529 aaKnown RBP15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Fgd4Q91ZT5 766 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gimap4Q99JY3 219 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Caln1Q9JJG7 219 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Dennd4bQ3U1Y4 1499 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gm9774A0A0A6YVU8 407 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Tex13cD3YU32 604 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Gm4841E9QAA8 417 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Lmbrd1Q8K0B2 537 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Champ1Q8K327 802 aaKnown RBP15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Cog4Q8R1U1 785 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Uap1Q91YN5 522 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Pdcd7Q9WTY1 482 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Akap17bA2A3V1 959 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms