RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Ints9Q8K114 658 aaKnown RBP20.52■□□□□ 0.88
Upf1-201ENSMUST00000075666 Meis3P97368 378 aa20.52■□□□□ 0.88
Upf1-201ENSMUST00000075666 Nme8Q715T0 586 aa20.52■□□□□ 0.88
Upf1-201ENSMUST00000075666 Abhd2Q9QXM0 425 aa20.52■□□□□ 0.88
Upf1-201ENSMUST00000075666 Wdhd1P59328 1117 aa20.52■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ccdc125Q5U465 500 aa20.52■□□□□ 0.87
Upf1-201ENSMUST00000075666 Lmbrd1Q8K0B2 537 aa20.52■□□□□ 0.87
Upf1-201ENSMUST00000075666 Gm38392E9Q2A2 434 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Sclt1G5E861 688 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Lonp1Q8CGK3 949 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Fbxo3Q9DC63 480 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Orc3Q9JK30 715 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Pfkfb3A7UAK5 555 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ube4aE9Q735 1028 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Art2bO35975 289 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Lrch1P62046 709 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Q3TTJ4 293 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Zbtb16Q3UQ17 673 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Tmprss11aQ3UQ41 389 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Tlr11Q6R5P0 926 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Mmgt1Q8K273 131 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Cd2bp2Q9CWK3 342 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Rpf2Q9JJ80 306 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Snx1Q9WV80 522 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Gm28360A0A087WR25 190 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 RcvrnP34057 202 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Rps8P62242 208 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ddb1Q3U1J4 1140 aaKnown RBP20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 AbraQ8BUZ1 375 aa20.51■□□□□ 0.87
Upf1-201ENSMUST00000075666 Gm4297D3YWB7 211 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Esr2O08537 530 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Tmod1P49813 359 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Fam83bQ0VBM2 1012 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ckap2Q3V1H1 664 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Arhgap44Q5SSM3 814 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Sorbs1Q62417 1290 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Smarca1Q6PGB8 1046 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Hdac6Q9Z2V5 1149 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 DohhA0A1Y7VJ29 135 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Xrcc5P27641 732 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Lrrc59Q922Q8 307 aaKnown RBP20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Capn9Q9D805 690 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 HnrnpcQ9Z204 313 aaKnown RBP20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Apba1B2RUJ5 842 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Kcnb1Q03717 857 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Trim37Q6PCX9 961 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Cadps2Q8BYR5 1297 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Pdzd4Q9QY39 772 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 CpdO89001 1377 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Cfap221A9Q751 836 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Rnpc3Q3UZ01 514 aaKnown RBP20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Rbm26Q6NZN0 1012 aaKnown RBP20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Taco1Q8K0Z7 294 aaKnown RBP20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Scrn1Q9CZC8 414 aa20.5■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ccdc175E9PVB3 822 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 PltpP55065 493 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Traf5P70191 558 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Fam81aQ3UXZ6 364 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 HelbQ6NVF4 1074 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 PodnQ7TQ62 611 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Thap12Q9CUX1 758 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Mphosph6Q9D1Q1 161 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 FibpQ9JI19 357 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Sh3tc1G3X9F6 1346 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 LtbrP50284 415 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Grin3bQ91ZU9 1003 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Pstpip2Q99M15 334 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Kcnq5Q9JK45 933 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ddx25Q9QY15 484 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Foxn3Q499D0 457 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Prm3Q62100 101 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 RgmbQ7TQ33 436 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Abhd8Q8R0P8 439 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Spats2lQ91WJ7 558 aaKnown RBP20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Alg1Q921Q3 482 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ddx47Q9CWX9 455 aaKnown RBP20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Arhgap42B2RQE8 841 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 GabrdP22933 449 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Nkx2-5P42582 318 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Wee1P47810 646 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Stap2Q8R0L1 411 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Spata17Q9D552 379 aa20.49■□□□□ 0.87
Upf1-201ENSMUST00000075666 Adat2Q6P6J0 191 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Prr18Q6PAN7 307 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Cfap36Q8C6E0 343 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Zfp449Q8CB76 518 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Mrps22Q9CXW2 359 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Krt34Q9D646 392 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Myo1hQ9D6A1 958 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 TnrQ8BYI9 1358 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Gm7168A0AUV4 508 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 D1Pas1P16381 660 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Eno1P17182 434 aaKnown RBP20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Fdx1P46656 188 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ccdc84Q4VA36 332 aaKnown RBP20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Glg1Q61543 1175 aaKnown RBP20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Ddx19bQ8BZY3 494 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 MgarpQ8VI64 283 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Fut8Q9WTS2 575 aa20.48■□□□□ 0.87
Upf1-201ENSMUST00000075666 Stag2O35638 1231 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms