RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Fam43aQ8BUP8 424 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Bbs7Q8K2G4 715 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Dph6Q9CQ28 267 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Tex21Q9R0U9 575 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Zfp408H7BX78 710 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rfpl4bJ3QPR6 266 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Kcnma1Q08460 1209 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Emc10Q3TAS6 258 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Tshz1Q5DTH5 1084 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 FntaQ61239 377 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Krt14Q61781 484 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Mettl25Q6NXH8 597 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Lrp2bpQ9D4C6 346 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 BcamQ9R069 622 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Trim30cD3YVI9 513 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Gad1P48318 593 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Kctd19Q562E2 927 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Mapk6Q61532 720 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 WaplQ65Z40 1200 aaKnown RBP17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Atp2b4Q6Q477 1205 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Actn1Q7TPR4 892 aaKnown RBP17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 D130040H23RikQ8BII3 405 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Hirip3Q8BLH7 601 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Bcas3Q8CCN5 928 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Smtnl1Q99LM3 459 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Cmtr1Q9DBC3 837 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Mrvi1Q9WUX5 899 aaKnown RBP17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Slc12a7Q9WVL3 1083 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ankrd35E9Q9D8 996 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Zfpm1O35615 995 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 ChkbO55229 394 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Jdp2P97875 163 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Dcaf17Q3TUL7 519 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Arglu1Q3UL36 271 aaKnown RBP17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Best3Q6H1V1 669 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Armc6Q8BNU0 468 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Golph3Q9CRA5 298 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 TicrrQ8BQ33 1889 aa17.69■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Kif3cO35066 796 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Pcsk7Q61139 770 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Gpr101Q80T62 511 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 SpidrQ8BGX7 933 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Kif17Q99PW8 1038 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Stx17Q9D0I4 301 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rpf2Q9JJ80 306 aaKnown RBP17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Cyp2ab1S4R196 498 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Capn2O08529 700 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 AoahO35298 574 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ighmbp2P40694 993 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Spata18Q0P557 537 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Scnn1aQ61180 699 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Sh3gl1Q62419 368 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ddx10Q80Y44 875 aaKnown RBP17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Klhl20Q8VCK5 604 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rnf34Q99KR6 376 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 ToporslQ9D2F8 683 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Pex11aQ9Z211 246 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Dnajb6O54946 365 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rnf207Q3V3A7 635 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Sycp1Q62209 993 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 GanQ8CA72 597 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ubxn1Q922Y1 297 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Prkab1Q9R078 270 aa17.68■□□□□ 0.42
Ckap4-201ENSMUST00000053871 1700016G14RikA0A286YCZ6 238 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Map7d2A2AG50 781 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Flvcr1B2RXV4 560 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Msh3P13705 1091 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Gna15P30678 374 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ncf1Q09014 390 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Vmn1r209Q5NC97 312 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Pacsin1Q61644 441 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 NfrkbQ6PIJ4 1296 aaKnown RBP17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Enox2Q8R0Z2 598 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Kbtbd4Q8R179 534 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Oxnad1Q8VE38 311 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Bhmt2Q91WS4 363 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Prpf6Q91YR7 941 aaKnown RBP17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rfc4Q99J62 364 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Nol7Q9D7Z3 254 aaKnown RBP17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Znf704Q9ERQ3 566 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Acot3Q9QYR7 432 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Nsun7Q14AW5 724 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Pde1cQ64338 706 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Parp10Q8CIE4 960 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Azi2Q9QYP6 405 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Trim10Q9WUH5 489 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 DexiQ9WUQ7 95 aa17.67■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Nr2f2P43135 414 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Mybl2P48972 704 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Rnf40Q3U319 1001 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Tcp10aQ80W76 438 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Morc2bQ8C5W4 1022 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Sh2b1Q91ZM2 756 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 WhrnQ80VW5 918 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ms4a5Q810P8 197 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Adcy3Q8VHH7 1145 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ppp1r3aQ99MR9 1089 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Slc5a5Q99PN0 618 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Gm28919A0A087WP35 240 aa17.66■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Sec24cG3X972 1096 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 126.1 ms