RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Pla2r1Q62028 1487 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Serpinb8O08800 374 aaKnown RBP17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm3414Q3TNU4 584 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 E2f8Q58FA4 860 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Asap3Q5U464 904 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cep70Q6IQY5 616 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Usp33Q8R5K2 909 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ces1dQ8VCT4 565 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pstpip2Q99M15 334 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pex3Q9QXY9 372 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zbtb18Q9WUK6 522 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cpb1B2RS76 415 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Wfs1P56695 890 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zfp418Q8BFS8 652 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fyb2A2A995 729 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm3248K7N721 186 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 StrnO55106 780 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ess2O70279 479 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 HarsQ61035 509 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 St13Q99L47 371 aaKnown RBP17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Lonrf3Q9D4H7 753 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Abcb6Q9DC29 842 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 HpdP49429 393 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cav1P49817 178 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Prkab2Q6PAM0 271 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fbxo11Q7TPD1 930 aaKnown RBP17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zfp113Q8C689 439 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Eps8l1Q8R5F8 716 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Telo2Q9DC40 840 aaKnown RBP17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm36028A0A0U1RPM1 299 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Anks1aP59672 1150 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fam178bQ24JP3 464 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Plcb4Q91UZ1 1175 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm5580A0A0N4SVP8 411 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Wdr24Q8CFJ9 790 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Wars2Q9CYK1 360 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 NfkbiaQ9Z1E3 314 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rsbn1lD3Z0K6 821 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 CalcaP70160 136 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tigd4Q8BUZ3 513 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cdc42bpaQ3UU96 1719 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Xrcc6P23475 608 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Serpinb3dQ6UKZ0 387 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Anks1bQ8BIZ1 1259 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cbx6Q9DBY5 414 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Psmd10Q9Z2X2 231 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zfp956Q3UZY6 572 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Atp6v0a1Q9Z1G4 839 aaKnown RBP17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Eif2ak1Q9Z2R9 619 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Klhl34A2AI76 644 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 1700122O11RikJ3QPW6 241 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Foxp3Q99JB6 429 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Igsf1Q7TQA1 1317 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ano3A2AHL1 981 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Lrrc6O88978 473 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Impdh2P24547 514 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zmym1Q3TJB1 983 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tada3Q8R0L9 432 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ttll1Q91V51 423 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Mms19Q9D071 1031 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cyth1Q9QX11 398 aa17.85■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Stam2O88811 523 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pla2g4cQ64GA5 597 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Llcfc1Q9D9P8 108 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Atp10aO54827 1508 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Dhx37Q6NZL1 1150 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pabpc4Q6PHQ9 660 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ppil4Q9CXG3 492 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tmem191cQ9JJB1 302 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 A630010A05RikA9C473 232 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Samsn1P57725 372 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Hdac11Q91WA3 347 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 LratQ9JI60 231 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pex11aQ9Z211 246 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ddx5Q61656 614 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fkbp6Q91XW8 327 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Serpina3iD3Z450 408 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Mdh1P14152 334 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Trim36Q80WG7 729 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Wbp11Q923D5 641 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm2237E9Q501 211 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm3591K7N6X2 186 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Znf598Q80YR4 908 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 PalmdQ9JHU2 551 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 AU022751B1B0V2 589 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Afap1l2Q5DTU0 825 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Sval3Q76I99 144 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rassf6Q80UQ2 353 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Prkag2Q91WG5 566 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Abcg3Q99P81 650 aa17.84■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Nlrp1bA1Z198 1177 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Il7P10168 154 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 CpQ61147 1061 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ckap2lQ7TS74 745 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Psma8Q9CWH6 250 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pls3Q99K51 630 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Drp2Q05AA6 957 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rbm43Q99J64 343 aa17.83■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ice1E9Q286 2241 aaKnown RBP17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rnf6Q9DBU5 667 aa17.83■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms