RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Stat3P42227 770 aaKnown RBP14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Akr1b1P45376 316 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Psmc2P46471 433 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Eme2Q56A04 373 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ddx31Q6NZQ2 687 aaKnown RBP14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 RbsnQ80Y56 783 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Q8C6G1 249 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Prl7b1Q8CGZ9 251 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Sugp2Q8CH09 1067 aa14.08□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Apol10bG3X9K7 334 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Fgd3O88842 733 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Pcif1P59114 706 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Spata18Q0P557 537 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Znf827Q505G8 1078 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Slc10a5Q5PT54 434 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Adgrg6Q6F3F9 1165 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 GanQ8CA72 597 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Krt222Q8CCX5 294 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Eif4a3Q91VC3 411 aaKnown RBP14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Lpin2Q99PI5 893 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 NapaQ9DB05 295 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nr1i3O35627 358 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nck2O55033 380 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Slc2a13Q3UHK1 637 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Tigd5Q499M4 642 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Cep70Q6IQY5 616 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 RragaQ80X95 313 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ttc7aQ8BGB2 858 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Havcr2Q8VIM0 281 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 AatfQ9JKX4 526 aaKnown RBP14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Trp53inp1Q9QXE4 239 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ifi202Q9R002 445 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gm11983V9GXS8 105 aa14.07□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Foxn2E9Q7L6 429 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Tal1P22091 329 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Sh3bp1P55194 680 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nlrp2Q4PLS0 1046 aaKnown RBP14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 MmeQ61391 750 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Krt14Q61781 484 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Asic3Q6X1Y6 530 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Pym1Q8CHP5 203 aaKnown RBP14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ccdc96Q9CR92 584 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nap1l5Q9JJF0 156 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Exoc3l2D3YUP5 789 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Men1O88559 611 aaKnown RBP14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 PaoxQ8C0L6 504 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Cog5Q8C0L8 829 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Sgms1Q8VCQ6 419 aa14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Syf2Q9D198 242 aaKnown RBP14.06□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Il13ra2O88786 383 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Snap25P60879 206 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Npr3P70180 536 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Sec31aQ3UPL0 1230 aaKnown RBP14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 NntQ61941 1086 aaKnown RBP14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ccdc93Q7TQK5 629 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 CoasyQ9DBL7 563 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 JcadQ5DTX6 1320 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 SynrgQ5SV85 1306 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rgs22G3UYX5 1258 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 OatP29758 439 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 SlmapQ3URD3 845 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Cacnb1Q8R3Z5 597 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Otud7bB2RUR8 840 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gm1758F6VZZ1 202 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Esr2O08537 530 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Csf1rP09581 977 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Psmc6P62334 389 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Agxt2Q3UEG6 513 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gm5169Q5M8P2 212 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gpt2Q8BGT5 522 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Traf3ip3Q8C0G2 513 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Csgalnact2Q8C1F4 542 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Vcpip1Q8CDG3 1220 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Apbb1ipQ8R5A3 670 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Kif17Q99PW8 1038 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Josd2Q9CR30 188 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Tbx18Q9EPZ6 613 aa14.05□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Usp17ldG5E8G2 545 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Usp17lcG5E8I7 545 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Enc1O35709 589 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Pafah1b1P63005 410 aaKnown RBP14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Siah1bQ06985 282 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Nlrp4cQ3TKR3 982 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Herc4Q6PAV2 1057 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rbm41Q8JZV4 413 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Prc1Q99K43 603 aaKnown RBP14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ubxn6Q99PL6 442 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 AurkbO70126 345 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Slc27a3O88561 667 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rtel1Q0VGM9 1203 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Rasip1Q3U0S6 961 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Gtpbp6Q3U6U5 514 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Large2Q5XPT3 690 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Fbxo11Q7TPD1 930 aaKnown RBP14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ccdc73Q8CDM4 1066 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ces4aQ8R0W5 563 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Ears2Q9CXJ1 523 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 4931423N10RikQ9D4J9 382 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Mzb1Q9D8I1 188 aa14.04□□□□□ -0.16
Rnf4-201ENSMUST00000030992 Azi2Q9QYP6 405 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms