RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Atf7Q8R0S1 413 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 SelenooQ9DBC0 667 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 HnrnpcQ9Z204 313 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kif20bQ80WE4 1774 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kdm6aO70546 1401 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Tnrc6cQ3UHC0 1690 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Sycp2lA0A0M3U1B0 842 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 4921501E09RikA0A0R4J054 908 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Tex28B1AYN9 409 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 RxrbP28704 520 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ephb2P54763 986 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Hspa8P63017 646 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Pfkfb1P70266 471 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Mthfd1lQ3V3R1 977 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Atf3Q60765 181 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Pde1aQ61481 565 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Atp2a3Q64518 1038 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ccdc82Q6PG04 518 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Cpa1Q7TPZ8 419 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Slc51bQ80WK2 128 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Mettl21cQ8BLU2 248 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 AidaQ8C4Q6 305 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Abcf3Q8K268 709 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Tceanc2Q8R2M0 207 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Usp11Q99K46 921 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Smco2Q9DA21 347 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Capn12Q9ER56 720 aa12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Gtf2ird1Q9JI57 1104 aaKnown RBP12.55□□□□□ -0.4
Trim55-201ENSMUST00000029139 Shank2Q80Z38 1476 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Prdm2A2A7B5 1709 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Gm13941A2AJ38 245 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 2210016F16RikG3X8U3 338 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Pafah1b1P63005 410 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Olfm3P63056 478 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kcnj13P86046 360 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 HnrnpdQ60668 355 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Rgl1Q60695 768 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Arhgap30Q640N3 1101 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Nlrp14Q6B966 993 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Alkbh8Q80Y20 664 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Osbpl6Q8BXR9 959 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ankk1Q8BZ25 745 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Pm20d1Q8C165 503 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Q8R1Y2 203 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Havcr2Q8VIM0 281 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 3830403N18RikQ9D6C3 208 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Cbx6Q9DBY5 414 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 IcmtQ9EQK7 283 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Orc1Q9Z1N2 840 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Myh7bA2AQP0 1941 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Osbpl9A2A8Z1 736 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Nup62clA2AG10 272 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 IkbkbO88351 757 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Pla2g4bP0C871 782 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Sox5P35710 763 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kpnb1P70168 876 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Serping1P97290 504 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Q14AM7 275 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Gm5168Q4KL04 211 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 CtcfQ61164 736 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Sun2Q8BJS4 731 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Scfd2Q8BTY8 684 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Taok3Q8BYC6 898 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Apol7cQ8C6E1 369 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Snx30Q8CE50 437 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Socs4Q91ZA6 436 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 MbipQ99LQ1 341 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ppil4Q9CXG3 492 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Klf15Q9EPW2 415 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Tnfrsf10bQ9QZM4 381 aa12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Uso1Q9Z1Z0 959 aaKnown RBP12.54□□□□□ -0.4
Trim55-201ENSMUST00000029139 Rbm8a2A0A0N4SUH6 174 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 IqccA2ADZ8 418 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ugt1a6bK9J7B2 531 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ube3aO08759 870 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 En2P09066 324 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ugt1a6Q64435 531 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Atp4aQ64436 1033 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ugt1a7cQ6ZQM8 531 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Zswim5Q80TC6 1188 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Dhx33Q80VY9 698 aaKnown RBP12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Enox1Q8BHR2 643 aaKnown RBP12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ncaph2Q8BSP2 607 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Vps37aQ8CHS8 397 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ppp1r42Q8R1Z4 357 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Dhx36Q8VHK9 1001 aaKnown RBP12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Vps36Q91XD6 386 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Prpf3Q922U1 683 aaKnown RBP12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 EpgnQ924X1 152 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Rtfdc1Q99K95 307 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kif17Q99PW8 1038 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Rbm8aQ9CWZ3 174 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Sesn3Q9CYP7 492 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ror2Q9Z138 944 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Plcb1Q9Z1B3 1216 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Usp42B2RQC2 1324 aaKnown RBP12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Slc27a2O35488 620 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Atp9aO70228 1047 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 FosbP13346 338 aa12.53□□□□□ -0.4
Trim55-201ENSMUST00000029139 Hoxd10P28359 340 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms