RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Hic2Q9JLZ6 619 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tnnc2P20801 160 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 PreplQ8C167 725 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GlyctkQ8QZY2 523 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Lonrf3Q9D4H7 753 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tmem191cQ9JJB1 302 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GdaQ9R111 454 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Erich2E9Q1A6 463 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pla2g4bP0C871 782 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Faf1P54731 649 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cdcp1Q5U462 833 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Wbp11Q923D5 641 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pramef12Q9D2F1 463 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 ArcQ9WV31 396 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Frmpd4A2AFR3 1320 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Kif14L0N7N1 1674 aaKnown RBP10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rims1Q99NE5 1463 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 1700029H14RikE9PY36 240 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm21962L7N280 338 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ap1m1P35585 423 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ap5z1Q3U829 807 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GlmnQ8BZM1 596 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 HibchQ8QZS1 385 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 CacybpQ9CXW3 229 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rabgef1Q9JM13 491 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Carmil3Q3UFQ8 1375 aa10.97□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Usp35M0QWN7 1009 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cyth3O08967 399 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Psmd14O35593 310 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm1604bQ3TRG0 118 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Sept11Q8C1B7 431 aaKnown RBP10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pnpt1Q8K1R3 783 aaKnown RBP10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ppp2r5dQ91V89 594 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Chchd3Q9CRB9 227 aaKnown RBP10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ap2b1Q9DBG3 937 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Scyl1Q9EQC5 806 aaKnown RBP10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Trim5E9PV98 497 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rasgrf1P27671 1262 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dab2ipQ3UHC7 1189 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cyp7b1Q60991 507 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dhx37Q6NZL1 1150 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Morc2bQ8C5W4 1022 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tmem63cQ8CBX0 802 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rpap2Q8VC34 614 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fam208aQ69ZR9 1610 aaKnown RBP10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Kcnb2A6H8H5 907 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Vmn2r68L7N2B3 851 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Eya3P97480 510 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fam228bQ497Q6 232 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Unc13aQ4KUS2 1712 aa10.96□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tcp11x2A2AEI7 503 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tubgcp3P58854 905 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hspa8P63017 646 aaKnown RBP10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gas7Q60780 421 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ttc26Q8BS45 554 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Serpinb10Q8K1K6 397 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hs6st3Q9QYK4 470 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Diaph3Q9Z207 1171 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Suclg2Q9Z2I8 433 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pde8bE9Q4S1 865 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Sco1Q5SUC9 284 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tex21Q9R0U9 575 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Anxa1P10107 346 aaKnown RBP10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 ZfaP23607 742 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gpc4P51655 557 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Iqsec3Q3TES0 1195 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 LrmpQ60664 539 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 GypcQ78HU7 95 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Actn1Q7TPR4 892 aaKnown RBP10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Snrnp35Q9D384 244 aa10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Wdr46Q9Z0H1 622 aaKnown RBP10.96□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kif6E9PX57 802 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Fen1P39749 378 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gfpt1P47856 697 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pak4Q8BTW9 593 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cxcl11Q9JHH5 100 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nos1Q9Z0J4 1429 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ano3A2AHL1 981 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gimap9G3X987 291 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 NxnP97346 435 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Khdrbs1Q60749 443 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cwf19l1Q8CI33 537 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Aipl1Q924K1 328 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kif9Q9WV04 790 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Zbtb12Q9Z150 459 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ak9G3UYQ4 1894 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Sik3Q6P4S6 1311 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Klhl41A2AUC9 606 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mroh8E9PYI4 1049 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pla2g4aP47713 748 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rufy4Q3TYX8 563 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Srek1ip1Q4V9W2 153 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 PicalmQ7M6Y3 660 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kctd10Q922M3 315 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 MrgbpQ9DAT2 204 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 GgcxQ9QYC7 757 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tarbp1E9Q368 1579 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Magi3Q9EQJ9 1476 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rsad1Q5SUV1 442 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mmgt1Q8K273 131 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms