RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 H2afvQ3THW5 128 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Slc44a1Q6X893 653 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Camsap3Q80VC9 1252 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 QarsQ8BML9 775 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Atf2P16951 487 aaKnown RBP18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Syt2P46097 422 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Psmc1P62192 440 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Gm14685Q52KH6 695 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Cct8l1Q80YT3 562 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Smim5Q8BT42 78 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Zfp317Q8C0Q5 607 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 NhsB1AV60 1647 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Gap43P06837 227 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Dok7Q18PE0 504 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 MaeaQ4VC33 396 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Csgalnact2Q8C1F4 542 aa18.1■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Nck2O55033 380 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Actn4P57780 912 aaKnown RBP18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Trip10Q8CJ53 603 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Atp1a1Q8VDN2 1023 aaKnown RBP18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Uap1Q91YN5 522 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Gstt4Q9D4P7 240 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Mrpl40Q9Z2Q5 206 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Psmc2P46471 433 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Pfdn1Q9CWM4 122 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Ccdc103Q9D9P2 237 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Magi2Q9WVQ1 1275 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 LtkP08923 888 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Alox15P39654 663 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Fam83bQ0VBM2 1012 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Nsrp1Q5NCR9 542 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Abca8bQ8K440 1620 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Cd3dP04235 173 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Pde6aP27664 859 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Dynll1P63168 89 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 C87499Q3UX49 493 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Ppp1r37Q8BKR5 712 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Gtf2iQ9ESZ8 998 aaKnown RBP18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 GgcxQ9QYC7 757 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Tmed2Q9R0Q3 201 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Mroh6V9GX81 722 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Arl1P61211 181 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Afg3l1Q920A7 789 aaKnown RBP18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Q922C1 641 aa18.09■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Eno1P17182 434 aaKnown RBP18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Trim71Q1PSW8 855 aaKnown RBP18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 TwistnbQ78WZ7 330 aaKnown RBP18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Armcx3Q8BHS6 379 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Dhx58Q99J87 678 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Myl7Q9QVP4 175 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Ube4aE9Q735 1028 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Slc3a2P10852 526 aaKnown RBP18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Rasgrf2P70392 1189 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Ehd4Q9EQP2 541 aa18.08■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Cep70Q6IQY5 616 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gprasp2Q8BUY8 826 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Dbndd2Q9CRD4 158 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ndufa13Q9ERS2 144 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Angptl2Q9R045 493 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Arhgef9Q3UTH8 516 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gucy2cQ3UWA6 1072 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Trpc6Q61143 930 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Bbs9Q811G0 885 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ankrd49Q8VE42 238 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Def8Q99J78 448 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 ArpinQ9D0A3 226 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Batf3Q9D275 118 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Adarb2Q9JI20 745 aa18.08■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Adcy9P51830 1353 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 CemipQ8BI06 1361 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Speer4f2E9Q366 295 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Hipk4Q3V016 616 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tbc1d9bQ5SVR0 1263 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Trim21Q62191 470 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Galnt15Q9D2N8 638 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ubxn11Q9D572 484 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 PolnQ7TQ07 864 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 SrlQ7TQ48 910 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Lyve1Q8BHC0 318 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Pih1h3bQ8C6P5 218 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Fsip1Q9D3V5 435 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Slc40a1Q9JHI9 570 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Pex3Q9QXY9 372 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Zscan12Q9Z1D7 501 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Snx12O70493 165 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Hif1aQ61221 836 aaKnown RBP18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Stx3Q64704 289 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Smg5Q6ZPY2 1017 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ccdc68Q8BVC4 333 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Mb21d2Q8C525 428 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ap2b1Q9DBG3 937 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Peg12Q9WVA7 283 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gm11983V9GXS8 105 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ap1b1O35643 943 aaKnown RBP18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Sco1Q5SUC9 284 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Map3k10Q66L42 940 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Clca2Q8BG22 942 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Atp6v1b1Q91YH6 513 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ssfa2Q922B9 1252 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 IcoslgQ9JHJ8 322 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms