RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Chmp6P0C0A3 200 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 FechP22315 420 aaKnown RBP13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 M6prP24668 278 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Kif5cP28738 956 aaKnown RBP13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Nedd4P46935 887 aaKnown RBP13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Casp4P70343 373 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 EgfrQ01279 1210 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 RelaQ04207 549 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ccdc138Q0VF22 680 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Adam1aQ60813 791 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 BcanQ61361 883 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ncapg2Q6DFV1 1138 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Krt74Q6IFZ9 495 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gpbp1Q6NXH3 473 aaKnown RBP13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Fmnl3Q6ZPF4 1028 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 B4galnt4Q766D5 1034 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Usp38Q8BW70 1042 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ctage5Q8R311 779 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Haus2Q9CQS9 234 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Psma8Q9CWH6 250 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Wdr64Q9D565 1086 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 3830403N18RikQ9D6C3 208 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Serpinb12Q9D7P9 423 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cxcl11Q9JHH5 100 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Serpinb6cW4VSP4 379 aa13.26□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cyp2c23E9Q5K4 494 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mx1P09922 631 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Tnni2P13412 182 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Lig1P37913 916 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ssrp1Q08943 708 aaKnown RBP13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Sec31aQ3UPL0 1230 aaKnown RBP13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Asap3Q5U464 904 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ppp2r2aQ6P1F6 447 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Inpp4bQ6P1Y8 924 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Sdccag8Q80UF4 717 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 GopcQ8BH60 463 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pym1Q8CHP5 203 aaKnown RBP13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 PdiltQ9DAN1 588 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Prl2c5Q9JLV9 222 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cacna2d3Q9Z1L5 1091 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ssc5dQ8BV57 1371 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Flt1P35969 1333 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Scn11aQ9R053 1765 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Clcn6O35454 870 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Prl2c3P04768 224 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gjb6P70689 261 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pstpip1P97814 415 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mapk6Q61532 720 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Otop3Q80UF9 577 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 LRWD1Q8BUI3 648 aaKnown RBP13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gpcpd1Q8C0L9 675 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ube2sQ921J4 223 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Glrx3Q9CQM9 337 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 PdhbQ9D051 359 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 4931423N10RikQ9D4J9 382 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Tacc2Q9JJG0 1149 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 UtrnE9Q6R7 3430 aa13.25□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Frmpd3A0A140LIW3 1774 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 TbcaP48428 108 aaKnown RBP13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Snrpa1P57784 255 aaKnown RBP13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Abi2P62484 446 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Myo1fP70248 1099 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gja5Q01231 358 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 MycbpapQ5SUV2 932 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 ChukQ60680 745 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gas8Q60779 478 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Sh3gl1Q62419 368 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pram1Q6BCL1 675 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 RragaQ80X95 313 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Triml1Q8BVP1 470 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Slc13a4Q8BZ82 625 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Champ1Q8K327 802 aaKnown RBP13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Dusp19Q8K4T5 220 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ciapin1Q8WTY4 309 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Prpf40aQ9R1C7 953 aaKnown RBP13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gpaa1Q9WTK3 621 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mapk8ip1Q9WVI9 707 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ambra1A2AH22 1300 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Aox3G3X982 1335 aa13.24□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Stox1B2RQL2 990 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cyp2c68K7N6C2 491 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Klrk1O54709 232 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ncf2O70145 525 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pdrg1P59048 133 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Sash1P59808 1230 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 PtgdrP70263 357 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Psg29Q3URN6 468 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pls1Q3V0K9 630 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gm5169Q5M8P2 212 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cyp24a1Q64441 514 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Aldh5a1Q8BWF0 523 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Spon1Q8VCC9 807 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pcdha5Q91Y15 934 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mphosph6Q9D1Q1 161 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Fam173bQ9D1Z3 247 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 March8Q9DBD2 286 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Git2Q9JLQ2 708 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pex3Q9QXY9 372 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Rnf4Q9QZS2 194 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Btbd18A0A0A6YY25 723 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms