RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C MRPS18P42847 217 aa4.85□□□□□ -1.63
PSE1YMR308C PNC1P53184 216 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C ART5P53244 586 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C ATC1Q04005 294 aa4.85□□□□□ -1.63
PSE1YMR308C CDC123Q05791 360 aa4.85□□□□□ -1.63
PSE1YMR308C YOL107WQ12239 342 aa4.85□□□□□ -1.63
PSE1YMR308C AGC1Q12482 902 aa4.85□□□□□ -1.63
PSE1YMR308C YBR298C-AQ8TGK4 73 aa4.85□□□□□ -1.63
PSE1YMR308C GAL2P13181 574 aa4.85□□□□□ -1.63
PSE1YMR308C VPS34P22543 875 aa4.85□□□□□ -1.63
PSE1YMR308C MIR1P23641 311 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C PDC6P26263 563 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C HEM12P32347 362 aaPredicted RBP4.85□□□□□ -1.63
PSE1YMR308C SPR1P32603 445 aa4.85□□□□□ -1.63
PSE1YMR308C SHM2P37291 469 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C YAR1P46683 200 aa4.85□□□□□ -1.63
PSE1YMR308C SAM37P50110 327 aa4.85□□□□□ -1.63
PSE1YMR308C SLD3P53135 668 aa4.85□□□□□ -1.63
PSE1YMR308C SDH1Q00711 640 aa4.85□□□□□ -1.63
PSE1YMR308C TIF35Q04067 274 aaKnown RBP4.85□□□□□ -1.63
PSE1YMR308C BCH1Q05029 724 aa4.85□□□□□ -1.63
PSE1YMR308C YLR053CQ12026 108 aa4.85□□□□□ -1.63
PSE1YMR308C SCC2Q04002 1493 aa4.85□□□□□ -1.63
PSE1YMR308C SPT3P06844 337 aa4.85□□□□□ -1.63
PSE1YMR308C REV1P12689 985 aa4.85□□□□□ -1.63
PSE1YMR308C SCJ1P25303 377 aa4.85□□□□□ -1.63
PSE1YMR308C YCR061WP25639 631 aa4.85□□□□□ -1.63
PSE1YMR308C PEP3P27801 918 aa4.85□□□□□ -1.63
PSE1YMR308C UBC8P28263 218 aa4.85□□□□□ -1.63
PSE1YMR308C PTC1P35182 281 aa4.85□□□□□ -1.63
PSE1YMR308C STB6P36085 766 aa4.85□□□□□ -1.63
PSE1YMR308C AIM18P38884 321 aa4.85□□□□□ -1.63
PSE1YMR308C RFC2P40348 353 aa4.85□□□□□ -1.63
PSE1YMR308C CDC40P40968 455 aaPredicted RBP4.85□□□□□ -1.63
PSE1YMR308C IDP2P41939 412 aa4.85□□□□□ -1.63
PSE1YMR308C YFL052WP43551 465 aa4.85□□□□□ -1.63
PSE1YMR308C RPC17P47076 161 aa4.85□□□□□ -1.63
PSE1YMR308C FMP48P53233 369 aa4.85□□□□□ -1.63
PSE1YMR308C YIP3P53633 176 aa4.85□□□□□ -1.63
PSE1YMR308C MTQ1P53944 314 aa4.85□□□□□ -1.63
PSE1YMR308C ATP25Q03153 612 aa4.85□□□□□ -1.63
PSE1YMR308C GIS1Q03833 894 aa4.85□□□□□ -1.63
PSE1YMR308C XYL2Q07993 356 aa4.85□□□□□ -1.63
PSE1YMR308C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
PSE1YMR308C YOL114CQ12322 202 aa4.85□□□□□ -1.63
PSE1YMR308C MAS1P10507 462 aa4.84□□□□□ -1.63
PSE1YMR308C EST1P17214 699 aaPredicted RBP4.84□□□□□ -1.63
PSE1YMR308C RNR3P21672 869 aaKnown RBP4.84□□□□□ -1.63
PSE1YMR308C DCC1P25559 380 aa4.84□□□□□ -1.63
PSE1YMR308C CCR4P31384 837 aaKnown RBP4.84□□□□□ -1.63
PSE1YMR308C BDF1P35817 686 aa4.84□□□□□ -1.63
PSE1YMR308C CCT2P39076 527 aaKnown RBP4.84□□□□□ -1.63
PSE1YMR308C RBG1P39729 369 aa4.84□□□□□ -1.63
PSE1YMR308C EAF5P39995 279 aa4.84□□□□□ -1.63
PSE1YMR308C CIN1P40987 1014 aa4.84□□□□□ -1.63
PSE1YMR308C PFA3P42836 336 aa4.84□□□□□ -1.63
PSE1YMR308C YGR201CP42936 225 aa4.84□□□□□ -1.63
PSE1YMR308C LSB6P42951 607 aa4.84□□□□□ -1.63
PSE1YMR308C ARC1P46672 376 aaKnown RBP4.84□□□□□ -1.63
PSE1YMR308C EKI1Q03764 534 aa4.84□□□□□ -1.63
PSE1YMR308C BLS1Q06071 122 aa4.84□□□□□ -1.63
PSE1YMR308C YPR078CQ06813 372 aa4.84□□□□□ -1.63
PSE1YMR308C YOR114WQ12219 294 aa4.84□□□□□ -1.63
PSE1YMR308C ARG4P04076 463 aaPredicted RBP4.84□□□□□ -1.63
PSE1YMR308C MRP1P10662 321 aaKnown RBP4.84□□□□□ -1.63
PSE1YMR308C MRP2P10663 115 aaPredicted RBP4.84□□□□□ -1.63
PSE1YMR308C CDC34P14682 295 aa4.84□□□□□ -1.63
PSE1YMR308C CLB2P24869 491 aa4.84□□□□□ -1.63
PSE1YMR308C IDH1P28834 360 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
PSE1YMR308C LST4P34239 828 aa4.84□□□□□ -1.63
PSE1YMR308C PTK1P36002 662 aaPredicted RBP4.84□□□□□ -1.63
PSE1YMR308C KKQ8P36004 724 aa4.84□□□□□ -1.63
PSE1YMR308C PSD1P39006 500 aa4.84□□□□□ -1.63
PSE1YMR308C KTR7P40504 517 aa4.84□□□□□ -1.63
PSE1YMR308C TOS3P43637 560 aa4.84□□□□□ -1.63
PSE1YMR308C YJL163CP46996 555 aa4.84□□□□□ -1.63
PSE1YMR308C YPL034WQ03083 165 aa4.84□□□□□ -1.63
PSE1YMR308C HDA2Q06629 674 aa4.84□□□□□ -1.63
PSE1YMR308C RCN2Q12044 265 aa4.84□□□□□ -1.63
PSE1YMR308C APM4Q99186 491 aa4.84□□□□□ -1.63
PSE1YMR308C CAT8P39113 1433 aa4.84□□□□□ -1.63
PSE1YMR308C TRP4P07285 380 aaPredicted RBP4.84□□□□□ -1.64
PSE1YMR308C SNF3P10870 884 aa4.84□□□□□ -1.64
PSE1YMR308C INO1P11986 533 aa4.84□□□□□ -1.64
PSE1YMR308C ARG8P18544 423 aa4.84□□□□□ -1.64
PSE1YMR308C SNF6P18888 332 aa4.84□□□□□ -1.64
PSE1YMR308C PRE7P23724 241 aaKnown RBP4.84□□□□□ -1.64
PSE1YMR308C YCP4P25349 247 aaKnown RBP4.84□□□□□ -1.64
PSE1YMR308C SIP2P34164 415 aaKnown RBP4.84□□□□□ -1.64
PSE1YMR308C GEX2P36173 615 aa4.84□□□□□ -1.64
PSE1YMR308C YCR087C-AP37263 153 aa4.84□□□□□ -1.64
PSE1YMR308C MNN9P39107 395 aaKnown RBP4.84□□□□□ -1.64
PSE1YMR308C GDS1P41913 522 aa4.84□□□□□ -1.64
PSE1YMR308C RTT101P47050 842 aa4.84□□□□□ -1.64
PSE1YMR308C HSV2P50079 448 aaPredicted RBP4.84□□□□□ -1.64
PSE1YMR308C AZR1P50080 613 aa4.84□□□□□ -1.64
PSE1YMR308C YGL185CP53100 379 aa4.84□□□□□ -1.64
PSE1YMR308C PRM15Q03262 622 aa4.84□□□□□ -1.64
PSE1YMR308C YDR179W-AQ03983 463 aa4.84□□□□□ -1.64
PSE1YMR308C YDR387CQ04162 555 aa4.84□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms