RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W IMG1P25626 169 aa4.74□□□□□ -1.65
ROT1YMR200W SLX1P38324 304 aa4.74□□□□□ -1.65
ROT1YMR200W DIA4P38705 446 aaPredicted RBP4.74□□□□□ -1.65
ROT1YMR200W MSR1P38714 643 aa4.74□□□□□ -1.65
ROT1YMR200W FUN12P39730 1002 aaKnown RBP4.74□□□□□ -1.65
ROT1YMR200W SNM1P40993 198 aa4.74□□□□□ -1.65
ROT1YMR200W UBX6P47049 396 aa4.74□□□□□ -1.65
ROT1YMR200W TOM22P49334 152 aa4.74□□□□□ -1.65
ROT1YMR200W SPO19Q03029 223 aa4.74□□□□□ -1.65
ROT1YMR200W YMR102CQ03177 834 aa4.74□□□□□ -1.65
ROT1YMR200W RTN1Q04947 295 aaKnown RBP4.74□□□□□ -1.65
ROT1YMR200W STE23Q06010 1027 aa4.74□□□□□ -1.65
ROT1YMR200W YLL007CQ07799 665 aa4.74□□□□□ -1.65
ROT1YMR200W DIS3Q08162 1001 aaKnown RBP4.74□□□□□ -1.65
ROT1YMR200W VAM3Q12241 283 aa4.74□□□□□ -1.65
ROT1YMR200W HXK2P04807 486 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W LEU4P06208 619 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W GAL3P13045 520 aa4.73□□□□□ -1.65
ROT1YMR200W KSS1P14681 368 aa4.73□□□□□ -1.65
ROT1YMR200W YSP3P25036 478 aa4.73□□□□□ -1.65
ROT1YMR200W PUP3P25451 205 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W HSP104P31539 908 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W RIM1P32445 135 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W ERG1P32476 496 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W BMH2P34730 273 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W PTK1P36002 662 aaPredicted RBP4.73□□□□□ -1.65
ROT1YMR200W SWC5P38326 303 aa4.73□□□□□ -1.65
ROT1YMR200W MNL1P38888 796 aa4.73□□□□□ -1.65
ROT1YMR200W RTR1P40084 226 aaPredicted RBP4.73□□□□□ -1.65
ROT1YMR200W SCC4P40090 624 aa4.73□□□□□ -1.65
ROT1YMR200W BRO1P48582 844 aa4.73□□□□□ -1.65
ROT1YMR200W YGR127WP53275 312 aa4.73□□□□□ -1.65
ROT1YMR200W PGA2P53903 129 aa4.73□□□□□ -1.65
ROT1YMR200W OCA2P53949 197 aa4.73□□□□□ -1.65
ROT1YMR200W REX2P54964 269 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W MFM1Q02783 413 aa4.73□□□□□ -1.65
ROT1YMR200W WAR1Q03631 944 aa4.73□□□□□ -1.65
ROT1YMR200W EKI1Q03764 534 aa4.73□□□□□ -1.65
ROT1YMR200W URC2Q04411 772 aa4.73□□□□□ -1.65
ROT1YMR200W ERV41Q04651 352 aa4.73□□□□□ -1.65
ROT1YMR200W CRT10Q08226 957 aa4.73□□□□□ -1.65
ROT1YMR200W ETT1Q08421 412 aaKnown RBP4.73□□□□□ -1.65
ROT1YMR200W LEA1Q08963 238 aaPredicted RBP4.73□□□□□ -1.65
ROT1YMR200W BAG7Q12128 409 aa4.73□□□□□ -1.65
ROT1YMR200W RKI1Q12189 258 aa4.73□□□□□ -1.65
ROT1YMR200W COX1P00401 534 aa4.72□□□□□ -1.65
ROT1YMR200W SPS4P09937 338 aa4.72□□□□□ -1.65
ROT1YMR200W RNR2P09938 399 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W RPL31BP0C2H9 113 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W SEC62P21825 274 aa4.72□□□□□ -1.65
ROT1YMR200W RPI1P23250 407 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W YCL068CP25593 260 aa4.72□□□□□ -1.65
ROT1YMR200W BEM1P29366 551 aa4.72□□□□□ -1.65
ROT1YMR200W HIR2P32480 875 aa4.72□□□□□ -1.65
ROT1YMR200W SIP1P32578 815 aa4.72□□□□□ -1.65
ROT1YMR200W ECM4P36156 370 aa4.72□□□□□ -1.65
ROT1YMR200W MRPL7P36519 292 aa4.72□□□□□ -1.65
ROT1YMR200W IMD2P38697 523 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W MSS2P40990 351 aa4.72□□□□□ -1.65
ROT1YMR200W DPB11P47027 764 aaPredicted RBP4.72□□□□□ -1.65
ROT1YMR200W EFM5P53200 248 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W YGR126WP53274 230 aa4.72□□□□□ -1.65
ROT1YMR200W COQ6P53318 479 aa4.72□□□□□ -1.65
ROT1YMR200W RTT102P53330 157 aa4.72□□□□□ -1.65
ROT1YMR200W PET117Q02771 107 aa4.72□□□□□ -1.65
ROT1YMR200W YMR160WQ03823 816 aa4.72□□□□□ -1.65
ROT1YMR200W UFO1Q04511 668 aa4.72□□□□□ -1.65
ROT1YMR200W RRN11Q04712 507 aa4.72□□□□□ -1.65
ROT1YMR200W NDL1Q06568 189 aa4.72□□□□□ -1.65
ROT1YMR200W DIB1Q06819 143 aaPredicted RBP4.72□□□□□ -1.65
ROT1YMR200W SLK19Q08581 821 aaKnown RBP4.72□□□□□ -1.65
ROT1YMR200W AI5_ALPHAQ9ZZX1 630 aa4.72□□□□□ -1.65
ROT1YMR200W CFT1Q06632 1357 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W CDC36P06100 191 aaPredicted RBP4.71□□□□□ -1.66
ROT1YMR200W ERG11P10614 530 aa4.71□□□□□ -1.66
ROT1YMR200W PMR1P13586 950 aa4.71□□□□□ -1.66
ROT1YMR200W GID7P25569 745 aa4.71□□□□□ -1.66
ROT1YMR200W RAD14P28519 371 aa4.71□□□□□ -1.66
ROT1YMR200W PRS1P32895 427 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W AAP1P37898 856 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W ASC1P38011 319 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W ICS2P38284 255 aa4.71□□□□□ -1.66
ROT1YMR200W YHR045WP38775 560 aa4.71□□□□□ -1.66
ROT1YMR200W UIP3P39547 235 aa4.71□□□□□ -1.66
ROT1YMR200W YIR014WP40570 242 aa4.71□□□□□ -1.66
ROT1YMR200W PMT6P42934 759 aa4.71□□□□□ -1.66
ROT1YMR200W PTR3P43606 678 aa4.71□□□□□ -1.66
ROT1YMR200W AIM22P47051 409 aa4.71□□□□□ -1.66
ROT1YMR200W NPA3P47122 385 aa4.71□□□□□ -1.66
ROT1YMR200W ASN1P49089 572 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W ASN2P49090 572 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W PIB2P53191 635 aa4.71□□□□□ -1.66
ROT1YMR200W DBP6P53734 629 aaKnown RBP4.71□□□□□ -1.66
ROT1YMR200W YDR541CQ03049 344 aa4.71□□□□□ -1.66
ROT1YMR200W MRPS17Q03246 237 aaPredicted RBP4.71□□□□□ -1.66
ROT1YMR200W CAB5Q03941 241 aa4.71□□□□□ -1.66
ROT1YMR200W YDR109CQ04585 715 aa4.71□□□□□ -1.66
ROT1YMR200W RRG8Q06109 277 aa4.71□□□□□ -1.66
ROT1YMR200W ECM30Q06673 1274 aa4.71□□□□□ -1.66
ROT1YMR200W VAC14Q06708 880 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms