RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	SDH3	P33421	198 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	RIM2	P38127	377 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	SEC27	P41811	889 aa	Known RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	MIC19	P43594	170 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TIM54	P47045	478 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	NAS6	P50086	228 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	BIO4	P53630	237 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YPL109C	Q02981	657 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YML131W	Q03102	365 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-DR2	Q03483	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YDR338C	Q05497	695 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YPS7	Q06325	596 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YPR011C	Q12251	326 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-B	Q12260	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-OR2	Q12293	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-DR1	Q12392	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-OR1	Q12439	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-DR3	Q99303	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	PRT1	P06103	763 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	CHA1	P25379	360 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	STP22	P25604	385 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	BUD14	P27637	709 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	NIP1	P32497	812 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	OAR1	P35731	278 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	RPS27A	P35997	82 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	DOA1	P36037	715 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	RPS27B	P38711	82 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	MAD2	P40958	196 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	PRM10	P42946	383 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	TRM9	P49957	279 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	SLM2	P53955	656 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	PRP38	Q00723	242 aa	Predicted RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	RNY1	Q02933	434 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	CSN9	Q03981	162 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	MMT2	Q08970	484 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	AKR2	Q12013	749 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	NMD4	Q12129	218 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	YCL012C	Q8J0M4	134 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	SUI1	P32911	108 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	OAF1	P39720	1047 aa	Predicted RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	ICE2	P40499	491 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
FOX2	YKR009C	URB2	P47108	1174 aa		4.06	□□□□□ -1.76
FOX2	YKR009C	EFM5	P53200	248 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	CHS5	Q12114	671 aa	Known RBP	4.06	□□□□□ -1.76
FOX2	YKR009C	RPP2B	P02400	110 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	TRX3	P25372	127 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	MGR1	P25573	417 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	ILV6	P25605	309 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	BMT2	P38278	337 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	SEC10	Q06245	871 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	RRP40	Q08285	240 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	YOL159C	Q08300	171 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	REX3	Q12090	404 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	TY4A-H	Q6Q5P6	413 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	RPS17A	P02407	136 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	RPS17B	P14127	136 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	NAR1	P23503	491 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	CAB3	P36076	571 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	ALG3	P38179	458 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	PHO89	P38361	574 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	MBP1	P39678	833 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	QDR1	P40475	563 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	AZF1	P41696	914 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	FKH2	P41813	862 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	ARC1	P46672	376 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	YGL176C	P46945	554 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	AIF1	P52923	378 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	ROG1	P53118	685 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	USA1	Q03714	838 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	RRB1	Q04225	511 aa	Known RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	YMR111C	Q04461	462 aa	Predicted RBP	4.05	□□□□□ -1.76
FOX2	YKR009C	YEH1	Q07804	573 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	YOR378W	Q08902	515 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	YPR015C	Q12531	247 aa		4.05	□□□□□ -1.76
FOX2	YKR009C	MXR2	P25566	168 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	YCR102C	P25608	368 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	CPR3	P25719	182 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	CMK1	P27466	446 aa	Known RBP	4.04	□□□□□ -1.76
FOX2	YKR009C	YBR062C	P38239	180 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	CAB2	P40506	365 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	NEO1	P40527	1151 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	LIA1	P47120	325 aa	Known RBP	4.04	□□□□□ -1.76
FOX2	YKR009C	UBX4	P54730	416 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	RIF2	Q06208	395 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	OMS1	Q06668	471 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	REX4	Q08237	289 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	YPL272C	Q08984	517 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	YLR053C	Q12026	108 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	YLL054C	Q12244	843 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	SRN2	Q99176	213 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	MEC1	P38111	2368 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	ARD1	P07347	238 aa	Predicted RBP	4.04	□□□□□ -1.76
FOX2	YKR009C	GLK1	P17709	500 aa	Known RBP	4.04	□□□□□ -1.76
FOX2	YKR009C	OCA4	P25366	362 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	FUN30	P31380	1131 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	ASK1	P35734	292 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	OMA1	P36163	345 aa		4.04	□□□□□ -1.76
FOX2	YKR009C	YBR139W	P38109	508 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms