RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W CAB2P40506 365 aa10.84□□□□□ -0.67
SIM1YIL123W CLU1Q03690 1277 aaKnown RBP10.84□□□□□ -0.67
SIM1YIL123W VPS74Q06385 345 aa10.84□□□□□ -0.67
SIM1YIL123W MHF2Q3E829 80 aa10.84□□□□□ -0.67
SIM1YIL123W GGC1P38988 300 aa10.84□□□□□ -0.67
SIM1YIL123W MPH1P40562 993 aa10.84□□□□□ -0.67
SIM1YIL123W BIR1P47134 954 aa10.84□□□□□ -0.67
SIM1YIL123W NPY1P53164 384 aa10.84□□□□□ -0.67
SIM1YIL123W BNI4P53858 892 aa10.84□□□□□ -0.67
SIM1YIL123W AQR1P53943 586 aa10.84□□□□□ -0.67
SIM1YIL123W NSE1Q07913 336 aa10.84□□□□□ -0.67
SIM1YIL123W YDR034W-BQ6Q5X2 51 aa10.84□□□□□ -0.67
SIM1YIL123W MDM12Q92328 271 aa10.84□□□□□ -0.67
SIM1YIL123W Q0182Q9ZZW1 134 aa10.84□□□□□ -0.67
SIM1YIL123W YPR096CO13587 100 aa10.83□□□□□ -0.68
SIM1YIL123W LEU4P06208 619 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W COR1P07256 457 aa10.83□□□□□ -0.68
SIM1YIL123W TAL1P15019 335 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W FAR1P21268 830 aa10.83□□□□□ -0.68
SIM1YIL123W CHL1P22516 861 aaPredicted RBP10.83□□□□□ -0.68
SIM1YIL123W ARP2P32381 391 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W SEC17P32602 292 aa10.83□□□□□ -0.68
SIM1YIL123W SPO23P33757 523 aa10.83□□□□□ -0.68
SIM1YIL123W VPS21P36017 210 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W SPC34P36131 295 aa10.83□□□□□ -0.68
SIM1YIL123W RIB1P38066 345 aa10.83□□□□□ -0.68
SIM1YIL123W AXL2P38928 823 aa10.83□□□□□ -0.68
SIM1YIL123W MNN9P39107 395 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W SWD1P39706 426 aa10.83□□□□□ -0.68
SIM1YIL123W THO1P40040 218 aaKnown RBP10.83□□□□□ -0.68
SIM1YIL123W YFR020WP43600 232 aa10.83□□□□□ -0.68
SIM1YIL123W ATP22P50273 684 aaPredicted RBP10.83□□□□□ -0.68
SIM1YIL123W COS12P53053 380 aa10.83□□□□□ -0.68
SIM1YIL123W COS7Q07788 383 aa10.83□□□□□ -0.68
SIM1YIL123W LOT6Q07923 191 aa10.83□□□□□ -0.68
SIM1YIL123W CET1O13297 549 aaPredicted RBP10.82□□□□□ -0.68
SIM1YIL123W RHO1P06780 209 aaKnown RBP10.82□□□□□ -0.68
SIM1YIL123W TRX3P25372 127 aa10.82□□□□□ -0.68
SIM1YIL123W RPC82P32349 654 aa10.82□□□□□ -0.68
SIM1YIL123W TFB1P32776 642 aa10.82□□□□□ -0.68
SIM1YIL123W MGM101P32787 269 aaKnown RBP10.82□□□□□ -0.68
SIM1YIL123W TIF3P34167 436 aaKnown RBP10.82□□□□□ -0.68
SIM1YIL123W DEF1P35732 738 aaKnown RBP10.82□□□□□ -0.68
SIM1YIL123W YBR285WP38354 144 aa10.82□□□□□ -0.68
SIM1YIL123W RAD30Q04049 632 aa10.82□□□□□ -0.68
SIM1YIL123W THP1Q08231 455 aa10.82□□□□□ -0.68
SIM1YIL123W RSA1Q08932 381 aa10.82□□□□□ -0.68
SIM1YIL123W WTM1Q12363 437 aaKnown RBP10.82□□□□□ -0.68
SIM1YIL123W RPP1BP10622 106 aaKnown RBP10.81□□□□□ -0.68
SIM1YIL123W UNG1P12887 359 aa10.81□□□□□ -0.68
SIM1YIL123W GAL3P13045 520 aa10.81□□□□□ -0.68
SIM1YIL123W PTP2P29461 750 aa10.81□□□□□ -0.68
SIM1YIL123W TMA20P89886 181 aaPredicted RBP10.81□□□□□ -0.68
SIM1YIL123W MUS81Q04149 632 aaPredicted RBP10.81□□□□□ -0.68
SIM1YIL123W PLB3Q08108 686 aa10.81□□□□□ -0.68
SIM1YIL123W VIK1Q12045 647 aa10.81□□□□□ -0.68
SIM1YIL123W NTO1Q12311 748 aa10.81□□□□□ -0.68
SIM1YIL123W NSI1Q12457 570 aa10.81□□□□□ -0.68
SIM1YIL123W HTA1P04911 132 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W FUS1P11710 512 aa10.8□□□□□ -0.68
SIM1YIL123W POL30P15873 258 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W PPZ1P26570 692 aa10.8□□□□□ -0.68
SIM1YIL123W CYS4P32582 507 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W CAT2P32796 670 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W SLX5P32828 619 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W SPC42P36094 363 aa10.8□□□□□ -0.68
SIM1YIL123W RCK1P38622 512 aa10.8□□□□□ -0.68
SIM1YIL123W YJL070CP40361 888 aa10.8□□□□□ -0.68
SIM1YIL123W EMC2P47133 292 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W TOM22P49334 152 aa10.8□□□□□ -0.68
SIM1YIL123W CCH1P50077 2039 aa10.8□□□□□ -0.68
SIM1YIL123W MUP1P50276 574 aa10.8□□□□□ -0.68
SIM1YIL123W YNR061CP53747 219 aa10.8□□□□□ -0.68
SIM1YIL123W ROT1Q03691 256 aa10.8□□□□□ -0.68
SIM1YIL123W REH1Q06709 432 aa10.8□□□□□ -0.68
SIM1YIL123W YPR084WQ06821 456 aa10.8□□□□□ -0.68
SIM1YIL123W SAM4Q08985 325 aaKnown RBP10.8□□□□□ -0.68
SIM1YIL123W SUL2Q12325 893 aa10.8□□□□□ -0.68
SIM1YIL123W RPS21AP0C0V8 87 aaKnown RBP10.79□□□□□ -0.68
SIM1YIL123W KSS1P14681 368 aa10.79□□□□□ -0.68
SIM1YIL123W SYP1P25623 870 aaKnown RBP10.79□□□□□ -0.68
SIM1YIL123W NTG1P31378 399 aa10.79□□□□□ -0.68
SIM1YIL123W CBP4P37267 147 aa10.79□□□□□ -0.68
SIM1YIL123W SIC1P38634 284 aa10.79□□□□□ -0.68
SIM1YIL123W YRB2P40517 327 aa10.79□□□□□ -0.68
SIM1YIL123W ARF3P40994 183 aaRIP-Chip data10.79□□□□□ -0.68not detected
SIM1YIL123W LSB3P43603 459 aaKnown RBP10.79□□□□□ -0.68
SIM1YIL123W DTD1Q07648 150 aaKnown RBP10.79□□□□□ -0.68
SIM1YIL123W OPI10Q08202 246 aa10.79□□□□□ -0.68
SIM1YIL123W DBP10Q12389 995 aaKnown RBP10.79□□□□□ -0.68
SIM1YIL123W TY2A-LR1P0C2J4 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-FP0CX61 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-GR2P0CX62 438 aa10.78□□□□□ -0.68
SIM1YIL123W CNA1P23287 553 aa10.78□□□□□ -0.68
SIM1YIL123W CTR86P25355 563 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-CP25383 438 aa10.78□□□□□ -0.68
SIM1YIL123W SAC1P32368 623 aaKnown RBP10.78□□□□□ -0.68
SIM1YIL123W SSE2P32590 693 aaKnown RBP10.78□□□□□ -0.68
SIM1YIL123W KKQ8P36004 724 aa10.78□□□□□ -0.68
SIM1YIL123W ARA1P38115 344 aa10.78□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms