RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W PSO2P30620 661 aa4.02□□□□□ -1.77
PTR3YFR029W CYM1P32898 989 aa4.02□□□□□ -1.77
PTR3YFR029W CBR1P38626 284 aaKnown RBP4.02□□□□□ -1.77
PTR3YFR029W PTC7P38797 343 aa4.02□□□□□ -1.77
PTR3YFR029W YNG2P38806 282 aaKnown RBP4.02□□□□□ -1.77
PTR3YFR029W ARO9P38840 513 aaPredicted RBP4.02□□□□□ -1.77
PTR3YFR029W PCL6P40038 420 aa4.02□□□□□ -1.77
PTR3YFR029W CDC40P40968 455 aaPredicted RBP4.02□□□□□ -1.77
PTR3YFR029W YFL066CP43538 392 aa4.02□□□□□ -1.77
PTR3YFR029W ARI1P53111 347 aaKnown RBP4.02□□□□□ -1.77
PTR3YFR029W WAR1Q03631 944 aa4.02□□□□□ -1.77
PTR3YFR029W RRP45Q05636 305 aaKnown RBP4.02□□□□□ -1.77
PTR3YFR029W DCS1Q06151 350 aa4.02□□□□□ -1.77
PTR3YFR029W GPN3Q06543 272 aa4.02□□□□□ -1.77
PTR3YFR029W TPO1Q07824 586 aa4.02□□□□□ -1.77
PTR3YFR029W LPX1Q12405 387 aaKnown RBP4.02□□□□□ -1.77
PTR3YFR029W RRD2Q12461 358 aa4.02□□□□□ -1.77
PTR3YFR029W DCP1Q12517 231 aaPredicted RBP4.02□□□□□ -1.77
PTR3YFR029W RAD9P14737 1309 aa4.01□□□□□ -1.77
PTR3YFR029W TDH2P00358 332 aaKnown RBP4.01□□□□□ -1.77
PTR3YFR029W TDH3P00359 332 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
PTR3YFR029W AAC1P04710 309 aa4.01□□□□□ -1.77
PTR3YFR029W TCP1P12612 559 aaKnown RBP4.01□□□□□ -1.77
PTR3YFR029W RPS5P26783 225 aaKnown RBP4.01□□□□□ -1.77
PTR3YFR029W ADE1P27616 306 aa4.01□□□□□ -1.77
PTR3YFR029W HIR2P32480 875 aa4.01□□□□□ -1.77
PTR3YFR029W APT2P36973 181 aa4.01□□□□□ -1.77
PTR3YFR029W IMD2P38697 523 aaKnown RBP4.01□□□□□ -1.77
PTR3YFR029W YHR177WP38867 453 aa4.01□□□□□ -1.77
PTR3YFR029W GPI16P38875 610 aa4.01□□□□□ -1.77
PTR3YFR029W BAP3P41815 604 aa4.01□□□□□ -1.77
PTR3YFR029W SNG1P46950 547 aa4.01□□□□□ -1.77
PTR3YFR029W YHC3P47040 408 aa4.01□□□□□ -1.77
PTR3YFR029W ROG1P53118 685 aa4.01□□□□□ -1.77
PTR3YFR029W ERG5P54781 538 aa4.01□□□□□ -1.77
PTR3YFR029W RSM28Q03430 361 aa4.01□□□□□ -1.77
PTR3YFR029W PLB2Q03674 706 aa4.01□□□□□ -1.77
PTR3YFR029W IVY1Q04934 453 aa4.01□□□□□ -1.77
PTR3YFR029W GMC2Q06201 188 aa4.01□□□□□ -1.77
PTR3YFR029W SNA4Q07549 140 aa4.01□□□□□ -1.77
PTR3YFR029W AFT2Q08957 416 aa4.01□□□□□ -1.77
PTR3YFR029W AIM41Q12032 185 aa4.01□□□□□ -1.77
PTR3YFR029W VIK1Q12045 647 aa4.01□□□□□ -1.77
PTR3YFR029W YOR029WQ12243 111 aa4.01□□□□□ -1.77
PTR3YFR029W GAL10P04397 699 aa4□□□□□ -1.77
PTR3YFR029W PMA1P05030 918 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W ALG1P16661 449 aa4□□□□□ -1.77
PTR3YFR029W MET16P18408 261 aaPredicted RBP4□□□□□ -1.77
PTR3YFR029W SPE2P21182 396 aa4□□□□□ -1.77
PTR3YFR029W CIN8P27895 1000 aa4□□□□□ -1.77
PTR3YFR029W YPS1P32329 569 aa4□□□□□ -1.77
PTR3YFR029W RIM1P32445 135 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W AGP2P38090 596 aa4□□□□□ -1.77
PTR3YFR029W SPP381P38282 291 aaPredicted RBP4□□□□□ -1.77
PTR3YFR029W FMC1P40491 155 aa4□□□□□ -1.77
PTR3YFR029W IDS2P46958 469 aa4□□□□□ -1.77
PTR3YFR029W DPB11P47027 764 aaPredicted RBP4□□□□□ -1.77
PTR3YFR029W MTL1P53214 551 aa4□□□□□ -1.77
PTR3YFR029W DRN1P53255 507 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W NOP13P53883 403 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PTR3YFR029W YNL146WP53906 100 aa4□□□□□ -1.77
PTR3YFR029W MFM1Q02783 413 aa4□□□□□ -1.77
PTR3YFR029W DIS3Q08162 1001 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W VAM3Q12241 283 aa4□□□□□ -1.77
PTR3YFR029W MTR10Q99189 972 aa4□□□□□ -1.77
PTR3YFR029W YOS9Q99220 542 aa4□□□□□ -1.77
PTR3YFR029W MF(ALPHA)1P01149 165 aa4□□□□□ -1.77
PTR3YFR029W CDC21P06785 304 aa4□□□□□ -1.77
PTR3YFR029W RNR2P09938 399 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W SRP54P20424 541 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W HXT2P23585 541 aa4□□□□□ -1.77
PTR3YFR029W FEN2P25621 512 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W GSY2P27472 705 aa4□□□□□ -1.77
PTR3YFR029W ECT1P33412 323 aa4□□□□□ -1.77
PTR3YFR029W YBR144CP34215 104 aa4□□□□□ -1.77
PTR3YFR029W MAL32P38158 584 aa4□□□□□ -1.77
PTR3YFR029W KAP104P38217 918 aaKnown RBP4□□□□□ -1.77
PTR3YFR029W RTT107P38850 1070 aa4□□□□□ -1.77
PTR3YFR029W YEL020CP39994 560 aa4□□□□□ -1.77
PTR3YFR029W BUR6P40096 142 aa4□□□□□ -1.77
PTR3YFR029W ATM1P40416 690 aa4□□□□□ -1.77
PTR3YFR029W SAD1P43589 448 aa4□□□□□ -1.77
PTR3YFR029W YGR079WP53249 370 aa4□□□□□ -1.77
PTR3YFR029W VOA1P53262 265 aa4□□□□□ -1.77
PTR3YFR029W MAL12P53341 584 aa4□□□□□ -1.77
PTR3YFR029W CUS2P53830 285 aaPredicted RBP4□□□□□ -1.77
PTR3YFR029W APC4Q04601 652 aa4□□□□□ -1.77
PTR3YFR029W ARG7Q04728 441 aa4□□□□□ -1.77
PTR3YFR029W YPR078CQ06813 372 aa4□□□□□ -1.77
PTR3YFR029W RXT3Q07458 294 aa4□□□□□ -1.77
PTR3YFR029W YLR040CQ07988 224 aa4□□□□□ -1.77
PTR3YFR029W CHS1P08004 1131 aa3.99□□□□□ -1.77
PTR3YFR029W RPL35AP0CX84 120 aaKnown RBP3.99□□□□□ -1.77
PTR3YFR029W RPL35BP0CX85 120 aaKnown RBP3.99□□□□□ -1.77
PTR3YFR029W PEP5P12868 1029 aa3.99□□□□□ -1.77
PTR3YFR029W CDC23P16522 626 aa3.99□□□□□ -1.77
PTR3YFR029W VMA16P23968 213 aa3.99□□□□□ -1.77
PTR3YFR029W PUP3P25451 205 aaKnown RBP3.99□□□□□ -1.77
PTR3YFR029W DSS4P32601 143 aa3.99□□□□□ -1.77
PTR3YFR029W UBC6P33296 250 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms