RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	MST28	P39552	234 aa		1.63	□□□□□ -2.15
CSN9	YDR179C	YMR181C	Q03231	154 aa		1.63	□□□□□ -2.15
CSN9	YDR179C	YEH1	Q07804	573 aa		1.63	□□□□□ -2.15
CSN9	YDR179C	SPE4	Q12455	300 aa		1.63	□□□□□ -2.15
CSN9	YDR179C	EST1	P17214	699 aa	Predicted RBP	1.62	□□□□□ -2.15
CSN9	YDR179C	GYP6	P32806	458 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	MSG5	P38590	489 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	CCT6	P39079	546 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	OST1	P41543	476 aa	Known RBP	1.62	□□□□□ -2.15
CSN9	YDR179C	AIM22	P47051	409 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	VHS1	Q03785	461 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	IOC4	Q04213	475 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	CTI6	Q08923	506 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	HUA2	Q12134	243 aa		1.62	□□□□□ -2.15
CSN9	YDR179C	PRB1	P09232	635 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	ATP11	P32453	318 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	NUP2	P32499	720 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	REC114	P32841	428 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	YKL097C	P34245	136 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	ARA1	P38115	344 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	FLC2	P39719	783 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	IES5	P40060	125 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	DPH1	P40487	425 aa	Known RBP	1.61	□□□□□ -2.15
CSN9	YDR179C	GAB1	P41733	394 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	LAM5	P43560	674 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	IMD4	P50094	524 aa	Known RBP	1.61	□□□□□ -2.15
CSN9	YDR179C	YGR066C	P53242	292 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	NCS2	P53923	493 aa	Predicted RBP	1.61	□□□□□ -2.15
CSN9	YDR179C	ECM11	Q04110	302 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	CUE5	Q08412	411 aa	Known RBP	1.61	□□□□□ -2.15
CSN9	YDR179C	NMD4	Q12129	218 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	PKH2	Q12236	1081 aa	Known RBP	1.61	□□□□□ -2.15
CSN9	YDR179C	YBR126W-A	Q8TGU7	68 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	YPT6	Q99260	215 aa		1.61	□□□□□ -2.15
CSN9	YDR179C	ELO2	P25358	347 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	PRD1	P25375	712 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	PEP3	P27801	918 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	POP5	P28005	173 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	TCD2	P36101	447 aa	Known RBP	1.6	□□□□□ -2.15
CSN9	YDR179C	UTP18	P40362	594 aa	Predicted RBP	1.6	□□□□□ -2.15
CSN9	YDR179C	SYG1	P40528	902 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	OCA1	P50946	238 aa	Predicted RBP	1.6	□□□□□ -2.15
CSN9	YDR179C	ATG16	Q03818	150 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	MRD1	Q06106	887 aa	Known RBP	1.6	□□□□□ -2.15
CSN9	YDR179C	OPY2	Q06810	360 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	TIM18	Q08749	192 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	AVL9	Q12500	764 aa		1.6	□□□□□ -2.15
CSN9	YDR179C	TOP1	P04786	769 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	NFT1	P0CE68	1218 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	RPS8A	P0CX39	200 aa	Known RBP	1.59	□□□□□ -2.15
CSN9	YDR179C	RPS8B	P0CX40	200 aa	Known RBP	1.59	□□□□□ -2.15
CSN9	YDR179C	TIP1	P27654	210 aa	Predicted RBP	1.59	□□□□□ -2.15
CSN9	YDR179C	NPL6	P32832	435 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	MRPL10	P36520	322 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	CHK1	P38147	527 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	TRS85	P46944	698 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	YJR085C	P47131	105 aa	Known RBP	1.59	□□□□□ -2.15
CSN9	YDR179C	LCL3	P53153	274 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	MTM1	P53320	366 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	SLG1	P54867	378 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	PPM1	Q04081	328 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	AIM32	Q04689	311 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	MFB1	Q04922	465 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	1.59	□□□□□ -2.15	not detected
CSN9	YDR179C	IES4	Q08561	116 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	YPQ1	Q12010	308 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	RLM1	Q12224	676 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	YJR112W-A	Q3E743	109 aa		1.59	□□□□□ -2.15
CSN9	YDR179C	TRP1	P00912	224 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	MUD1	P32605	298 aa	Known RBP	1.58	□□□□□ -2.16
CSN9	YDR179C	YCR041W	P37265	110 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	NOP4	P37838	685 aa	Known RBP	1.58	□□□□□ -2.16
CSN9	YDR179C	MRPS9	P38120	278 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	REG2	P38232	338 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	VID24	P38263	362 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	DFG10	P40526	253 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	BRO1	P48582	844 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	YIP1	P53039	248 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	HXT11	P54862	567 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	YMR018W	Q04364	514 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	VPS38	Q05919	439 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	RCN2	Q12044	265 aa		1.58	□□□□□ -2.16
CSN9	YDR179C	RHO2	P06781	192 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	SEC53	P07283	254 aa	Known RBP	1.57	□□□□□ -2.16
CSN9	YDR179C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	1.57	□□□□□ -2.16	not detected
CSN9	YDR179C	RPL31B	P0C2H9	113 aa	Known RBP	1.57	□□□□□ -2.16
CSN9	YDR179C	ECM27	P47144	725 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	DUO1	P53168	247 aa	Known RBP	1.57	□□□□□ -2.16
CSN9	YDR179C	DSL1	P53847	754 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	YML131W	Q03102	365 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	YDR239C	Q03780	787 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	YKU80	Q04437	629 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	NDE2	Q07500	545 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	SGT1	Q08446	395 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	YDL007C-A	Q2V2Q0	85 aa		1.57	□□□□□ -2.16
CSN9	YDR179C	HIS4	P00815	799 aa	Known RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	ARG4	P04076	463 aa	Predicted RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	CDC16	P09798	840 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	SNT1	P25357	1226 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	PWP2	P25635	923 aa	Known RBP	1.56	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms