RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W AHA1Q12449 350 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W YLR422WQ06409 1932 aa3.34□□□□□ -1.87
NUP60YAR002W ATP6P00854 259 aa3.33□□□□□ -1.88
NUP60YAR002W TPK2P06245 380 aa3.33□□□□□ -1.88
NUP60YAR002W SST2P11972 698 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W DBR1P24309 405 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W CSM1P25651 190 aa3.33□□□□□ -1.88
NUP60YAR002W BUB2P26448 306 aaPredicted RBP3.33□□□□□ -1.88
NUP60YAR002W PHO91P27514 894 aa3.33□□□□□ -1.88
NUP60YAR002W ATP7P30902 174 aa3.33□□□□□ -1.88
NUP60YAR002W CSE1P33307 960 aa3.33□□□□□ -1.88
NUP60YAR002W ALY1P36117 915 aa3.33□□□□□ -1.88
NUP60YAR002W YBL029WP38201 376 aa3.33□□□□□ -1.88
NUP60YAR002W ARP1P38696 384 aa3.33□□□□□ -1.88
NUP60YAR002W EFM1P38732 585 aa3.33□□□□□ -1.88
NUP60YAR002W YEN1P40028 759 aa3.33□□□□□ -1.88
NUP60YAR002W JHD1P40034 492 aa3.33□□□□□ -1.88
NUP60YAR002W YIL161WP40449 235 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W UBP7P40453 1071 aa3.33□□□□□ -1.88
NUP60YAR002W SIP4P46954 829 aa3.33□□□□□ -1.88
NUP60YAR002W SSY5P47002 699 aa3.33□□□□□ -1.88
NUP60YAR002W NOP9P47077 666 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W PSP1P50896 841 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W CLD1P53264 445 aa3.33□□□□□ -1.88
NUP60YAR002W IPI3P53877 555 aa3.33□□□□□ -1.88
NUP60YAR002W HSP31Q04432 237 aa3.33□□□□□ -1.88
NUP60YAR002W RCO1Q04779 684 aa3.33□□□□□ -1.88
NUP60YAR002W CRR1Q05790 422 aa3.33□□□□□ -1.88
NUP60YAR002W RIF2Q06208 395 aa3.33□□□□□ -1.88
NUP60YAR002W PSR1Q07800 427 aa3.33□□□□□ -1.88
NUP60YAR002W SGT1Q08446 395 aa3.33□□□□□ -1.88
NUP60YAR002W YLR049CQ12110 428 aa3.33□□□□□ -1.88
NUP60YAR002W YLR046CQ12253 270 aa3.33□□□□□ -1.88
NUP60YAR002W PEX11Q12462 236 aa3.33□□□□□ -1.88
NUP60YAR002W SAS5Q99314 248 aa3.33□□□□□ -1.88
NUP60YAR002W VPS13Q07878 3144 aa3.33□□□□□ -1.88
NUP60YAR002W LST4P34239 828 aa3.33□□□□□ -1.88
NUP60YAR002W SLM4P38247 162 aa3.33□□□□□ -1.88
NUP60YAR002W IST2P38250 946 aa3.33□□□□□ -1.88
NUP60YAR002W YHR045WP38775 560 aa3.33□□□□□ -1.88
NUP60YAR002W BEM4P39011 633 aa3.33□□□□□ -1.88
NUP60YAR002W PZF1P39933 429 aa3.33□□□□□ -1.88
NUP60YAR002W DOT6P40059 670 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W PAN6P40459 309 aa3.33□□□□□ -1.88
NUP60YAR002W MET18P40469 1032 aa3.33□□□□□ -1.88
NUP60YAR002W FAF1P40546 346 aaPredicted RBP3.33□□□□□ -1.88
NUP60YAR002W IME4P41833 600 aa3.33□□□□□ -1.88
NUP60YAR002W YRB1P41920 201 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W RSC8P43609 557 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W PMT3P47190 753 aa3.33□□□□□ -1.88
NUP60YAR002W MNN10P50108 393 aaKnown RBP3.33□□□□□ -1.88
NUP60YAR002W GET1P53192 235 aa3.33□□□□□ -1.88
NUP60YAR002W YNL143CP53908 130 aa3.33□□□□□ -1.88
NUP60YAR002W ARP4P80428 489 aa3.33□□□□□ -1.88
NUP60YAR002W PRP38Q00723 242 aaPredicted RBP3.33□□□□□ -1.88
NUP60YAR002W SPO19Q03029 223 aa3.33□□□□□ -1.88
NUP60YAR002W YMR206WQ03695 313 aa3.33□□□□□ -1.88
NUP60YAR002W YLR413WQ06689 675 aa3.33□□□□□ -1.88
NUP60YAR002W MUM3Q08750 479 aa3.33□□□□□ -1.88
NUP60YAR002W NDD1Q08887 554 aa3.33□□□□□ -1.88
NUP60YAR002W HUA2Q12134 243 aa3.33□□□□□ -1.88
NUP60YAR002W SWM1Q12379 170 aa3.33□□□□□ -1.88
NUP60YAR002W NKP1Q12493 238 aa3.33□□□□□ -1.88
NUP60YAR002W MSS18P08593 268 aa3.32□□□□□ -1.88
NUP60YAR002W COS2P0CX12 379 aa3.32□□□□□ -1.88
NUP60YAR002W COS3P0CX13 379 aa3.32□□□□□ -1.88
NUP60YAR002W GUK1P15454 187 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W PHO81P17442 1178 aa3.32□□□□□ -1.88
NUP60YAR002W ARF2P19146 181 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W PMA2P19657 947 aa3.32□□□□□ -1.88
NUP60YAR002W CCA1P21269 546 aa3.32□□□□□ -1.88
NUP60YAR002W DAL81P21657 970 aa3.32□□□□□ -1.88
NUP60YAR002W PPH22P23595 377 aa3.32□□□□□ -1.88
NUP60YAR002W PEX1P24004 1043 aa3.32□□□□□ -1.88
NUP60YAR002W GEX1P25596 615 aa3.32□□□□□ -1.88
NUP60YAR002W NGG1P32494 702 aa3.32□□□□□ -1.88
NUP60YAR002W COX13P32799 129 aa3.32□□□□□ -1.88
NUP60YAR002W RPS1AP33442 255 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W PHO11P35842 467 aa3.32□□□□□ -1.88
NUP60YAR002W FRE2P36033 711 aa3.32□□□□□ -1.88
NUP60YAR002W STB6P36085 766 aa3.32□□□□□ -1.88
NUP60YAR002W GEX2P36173 615 aa3.32□□□□□ -1.88
NUP60YAR002W FTH1P38310 465 aa3.32□□□□□ -1.88
NUP60YAR002W TDP1P38319 544 aa3.32□□□□□ -1.88
NUP60YAR002W SIC1P38634 284 aa3.32□□□□□ -1.88
NUP60YAR002W PHO12P38693 467 aa3.32□□□□□ -1.88
NUP60YAR002W TDA11P38854 504 aa3.32□□□□□ -1.88
NUP60YAR002W CYC2P38909 366 aa3.32□□□□□ -1.88
NUP60YAR002W MPT5P39016 859 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
NUP60YAR002W DHH1P39517 506 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W EXO1P39875 702 aa3.32□□□□□ -1.88
NUP60YAR002W ARB1P40024 610 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W PDS1P40316 373 aaPredicted RBP3.32□□□□□ -1.88
NUP60YAR002W SNL1P40548 159 aa3.32□□□□□ -1.88
NUP60YAR002W IMA5P40884 581 aa3.32□□□□□ -1.88
NUP60YAR002W FKH2P41813 862 aa3.32□□□□□ -1.88
NUP60YAR002W COS4P43542 379 aa3.32□□□□□ -1.88
NUP60YAR002W FMP32P43557 207 aa3.32□□□□□ -1.88
NUP60YAR002W MPS3P47069 682 aa3.32□□□□□ -1.88
NUP60YAR002W BNA2P47125 453 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms