RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
PHGDH-233ENST00000642021 FRMPD2Q68DX3 1309 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 TACC1O75410 805 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 IVLP07476 585 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 NT5C2P49902 561 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 GSTO1P78417 241 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 CALCRLQ16602 461 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 ECM1Q16610 540 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 LRRC55Q6ZSA7 311 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 ANKRD65E5RJM6 399 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 AKR1B10O60218 316 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 USO1O60763 962 aaKnown RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 LCA5LO95447 670 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 PPP1R2P41236 205 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 MAN2A1Q16706 1144 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
PHGDH-233ENST00000642021 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 MMGT1Q8N4V1 131 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 OSBPL9Q96SU4 736 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 DEF6Q9H4E7 631 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 RSPH14Q9UHP6 348 aa15.35■□□□□ 0.05
PHGDH-233ENST00000642021 KCNMA1Q12791 1236 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 SKIDA1Q1XH10 827 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 TEX11Q8IYF3 940 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 GUF1Q8N442 669 aaKnown RBP15.34■□□□□ 0.05
PHGDH-233ENST00000642021 DDX12PQ92771 950 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
PHGDH-233ENST00000642021 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 PVALEFA0A1B0GWK0 134 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 SLC20A2Q08357 652 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 ASTE1Q2TB18 679 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-233ENST00000642021 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 RIOX1Q9H6W3 641 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
PHGDH-233ENST00000642021 MAST2Q6P0Q8 1798 aa15.33■□□□□ 0.05
PHGDH-233ENST00000642021 LDHCP07864 332 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 MAGEA1P43355 309 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■□ 19.3
PHGDH-233ENST00000642021 RASSF7Q02833 373 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.041e-7■■■■□ 19.4
PHGDH-233ENST00000642021 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 GPR75-ASB3A0A0A6YYF3 556 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 BUB1O43683 1085 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-233ENST00000642021 PDHBP11177 359 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 RHBDL3P58872 404 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 APBA1Q02410 837 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 EHHADHQ08426 723 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 TMC4Q7Z404 712 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 RAD54LQ92698 747 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 TLR10Q9BXR5 811 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 MYH1P12882 1939 aa15.33■□□□□ 0.04
PHGDH-233ENST00000642021 PRLRP16471 622 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 SLC1A4P43007 532 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
PHGDH-233ENST00000642021 GRAPQ13588 217 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 ZNF572Q7Z3I7 529 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-233ENST00000642021 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-233ENST00000642021 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-233ENST00000642021 SNX29Q8TEQ0 813 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 FGFBP2Q9BYJ0 223 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 RASSF4Q9H2L5 321 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 ZNF287Q9HBT7 754 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 GOLGA6BA6NDN3 693 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 RGL2O15211 777 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 GOLGA6L1Q8N7Z2 621 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 MYH10P35580 1976 aa15.32■□□□□ 0.04
PHGDH-233ENST00000642021 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 TLR2O60603 784 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 NOVP48745 357 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 GPSM2P81274 684 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 KLHDC7AQ5VTJ3 777 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 IQCEQ6IPM2 695 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 PDXDC1Q6P996 788 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 ZNF804AQ7Z570 1209 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
PHGDH-233ENST00000642021 TSPYL1Q9H0U9 437 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 NOL4O94818 638 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 SMARCA1P28370 1054 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 UBE2SQ16763 222 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
PHGDH-233ENST00000642021 TSEN2Q8NCE0 465 aaKnown RBP15.31■□□□□ 0.04
PHGDH-233ENST00000642021 IQCDQ96DY2 449 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms