RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RBM26Q5T8P6 1007 aaKnown RBP19.04■□□□□ 0.64
PHGDH-211ENST00000641213 GUF1Q8N442 669 aaKnown RBP19.04■□□□□ 0.64
PHGDH-211ENST00000641213 MBOAT7Q96N66 472 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 AMNQ9BXJ7 453 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 KCNMB3Q9NPA1 279 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 SPDYE4A6NLX3 237 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 EFCAB8A8MWE9 144 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 GH2P01242 217 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 IDEP14735 1019 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 PSMD2Q13200 908 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 AP3B2Q13367 1082 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 UBXN4Q92575 508 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 NOC4LQ9BVI4 516 aaKnown RBP19.03■□□□□ 0.64
PHGDH-211ENST00000641213 TTYH3Q9C0H2 523 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 KDM3AQ9Y4C1 1321 aa19.03■□□□□ 0.64
PHGDH-211ENST00000641213 RASSF10A6NK89 507 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
PHGDH-211ENST00000641213 C21orf2O43822 256 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 H2AFXP16104 143 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-211ENST00000641213 CBX1P83916 185 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 SYDE2Q5VT97 1194 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 DNAJC19Q96DA6 116 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 UIMC1Q96RL1 719 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 CSRNP1Q96S65 589 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
PHGDH-211ENST00000641213 SLF1Q9BQI6 1058 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 NT5C3AQ9H0P0 336 aa19.02■□□□□ 0.64
PHGDH-211ENST00000641213 ABL1P00519 1130 aa19.02■□□□□ 0.63
PHGDH-211ENST00000641213 HOXA7P31268 230 aaPredicted RBP19.02■□□□□ 0.63
PHGDH-211ENST00000641213 WDR59Q6PJI9 974 aa19.02■□□□□ 0.63
PHGDH-211ENST00000641213 MOXD1Q6UVY6 613 aa19.02■□□□□ 0.63
PHGDH-211ENST00000641213 FBXO11Q86XK2 927 aa19.02■□□□□ 0.63
PHGDH-211ENST00000641213 NUP58Q9BVL2 599 aa19.02■□□□□ 0.63
PHGDH-211ENST00000641213 EPN1Q9Y6I3 576 aaPredicted RBP19.02■□□□□ 0.63
PHGDH-211ENST00000641213 NDUFA10O95299 355 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 BMP3P12645 472 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 ARHGAP25P42331 645 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 KLK7P49862 253 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 EZH2Q15910 746 aaKnown RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 ZNF569Q5MCW4 686 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 RETREG2Q8NC44 543 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 ERGIC2Q96RQ1 377 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 DDX41Q9UJV9 622 aaKnown RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 A0A1W2PRG0 241 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 TRIM21P19474 475 aaKnown RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 ARHGAP4P98171 946 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 PPP2R3AQ06190 1150 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 TSR1Q2NL82 804 aaKnown RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 USH1GQ495M9 461 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 BTNL9Q6UXG8 535 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 AGPAT5Q9NUQ2 364 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 KIAA1024Q9UPX6 916 aa19.01■□□□□ 0.63
PHGDH-211ENST00000641213 REXO2Q9Y3B8 237 aaKnown RBP19.01■□□□□ 0.63
PHGDH-211ENST00000641213 KIF13BQ9NQT8 1826 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 E9PMD0 336 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 MMP14P50281 582 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 LRRC63Q05C16 580 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 COASYQ13057 564 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 MCTP2Q6DN12 878 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 SLFN12Q8IYM2 578 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 GLIS3Q8NEA6 775 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 STK32BQ9NY57 414 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 OGFRQ9NZT2 677 aa19■□□□□ 0.63
PHGDH-211ENST00000641213 SLC26A4O43511 780 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 LRRC41Q15345 812 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 MEA1Q16626 185 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.99■□□□□ 0.632e-7■■■■□ 19.6
PHGDH-211ENST00000641213 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
PHGDH-211ENST00000641213 POTEB3A0JP26 581 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 SPDYE2BA6NHP3 402 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 POTECB2RU33 542 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 TCP10L2B9ZVM9 353 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 FGFR1OPO95684 399 aaKnown RBP18.99■□□□□ 0.63
PHGDH-211ENST00000641213 SPDYE6P0CI01 402 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-211ENST00000641213 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 POTEBQ6S5H4 581 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 SLC35F6Q8N357 371 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 ETNPPLQ8TBG4 499 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 CAMKK2Q96RR4 588 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 PANK4Q9NVE7 773 aa18.99■□□□□ 0.63
PHGDH-211ENST00000641213 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHGDH-211ENST00000641213 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-211ENST00000641213 STAT3P40763 770 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 ZBED6P86452 979 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 Q4G0T1 1027 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 VWA3BQ502W6 1294 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 PRR16Q569H4 304 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 FIGNQ5HY92 759 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 RSBN1LQ6PCB5 846 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-211ENST00000641213 FOXR2Q6PJQ5 311 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 LRRC55Q6ZSA7 311 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-211ENST00000641213 BMP2KQ9NSY1 1161 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-211ENST00000641213 TMOD2Q9NZR1 351 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 MYO1AQ9UBC5 1043 aa18.98■□□□□ 0.63
PHGDH-211ENST00000641213 SYNPO2Q9UMS6 1093 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms