RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 GCFC2P16383 781 aaKnown RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 PSMC4P43686 418 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 ALDH5A1P51649 535 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 NUBP1P53384 320 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 PTPAQ15257 358 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 INF2Q27J81 1249 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 Q4G0T1 1027 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 MCTP1Q6DN14 999 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 FCHSD1Q86WN1 690 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 NPLOC4Q8TAT6 608 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 ZNF296Q8WUU4 475 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 TNPO1Q92973 898 aaKnown RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 MAML3Q96JK9 1138 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 POLR3EQ9NVU0 708 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 ADD3Q9UEY8 706 aaKnown RBP10.39□□□□□ -0.75
SCARB2-225ENST00000640900 IVNS1ABPQ9Y6Y0 642 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 CASP8AP2Q9UKL3 1982 aa10.39□□□□□ -0.75
SCARB2-225ENST00000640900 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 FAM86B1E9PN63 330 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 FAM86B2P0C5J1 330 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 ITGB5P18084 799 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 ICAM3P32942 547 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 RGS2P41220 211 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 MTMR9Q96QG7 549 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 USP28Q96RU2 1077 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 KCNMB3Q9NPA1 279 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 PCDHB6Q9Y5E3 794 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 CENPFP49454 3210 aa10.38□□□□□ -0.75
SCARB2-225ENST00000640900 TCHHQ07283 1943 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 RBM47A0AV96 593 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 ASB14A6NK59 587 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 TNPO2O14787 897 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 EIF3JO75822 258 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 TDP2O95551 362 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 SNAI1O95863 264 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 PRMT2P55345 433 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 SLC39A14Q15043 492 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 TTC38Q5R3I4 469 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 ARHGEF16Q5VV41 709 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 LINC00301Q8NCQ3 95 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 CYP2W1Q8TAV3 490 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 ETNPPLQ8TBG4 499 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 CD99L2Q8TCZ2 262 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 NAP1L4Q99733 375 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 APBA2Q99767 749 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 EHMT1Q9H9B1 1298 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 JADE2Q9NQC1 790 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 FLRT1Q9NZU1 646 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 SRRDQ9UH36 339 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 NOL7Q9UMY1 257 aaKnown RBP10.37□□□□□ -0.75
SCARB2-225ENST00000640900 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
SCARB2-225ENST00000640900 TBX3O15119 743 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 MAFGO15525 162 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 SLC37A4O43826 429 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 YEATS4O95619 227 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 BMP15O95972 392 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 HSPA8P11142 646 aaKnown RBP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 EIF2AK2P19525 551 aaKnown RBP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 CCND2P30279 289 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 FLT3LGP49771 235 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 PRKCZQ05513 592 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 NBR1Q14596 966 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 STXBP2Q15833 593 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 LETM2Q2VYF4 491 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 WDR78Q5VTH9 848 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 CCDC62Q6P9F0 684 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 B3GNT9Q6UX72 402 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 FOXD4L4Q8WXT5 416 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 HAS1Q92839 578 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 GPRASP2Q96D09 838 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 CHAMP1Q96JM3 812 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 ZNF396Q96N95 335 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 TINF2Q9BSI4 451 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
SCARB2-225ENST00000640900 TMEM60Q9H2L4 133 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 SLC5A4Q9NY91 659 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
SCARB2-225ENST00000640900 MCM3APO60318 1980 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms