RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 TRAF5O00463 557 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 WFS1O76024 890 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 CBX7O95931 251 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 GOLGA6DP0CG33 693 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 IFNGR1P15260 489 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 LSSP48449 732 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 HDAC1Q13547 482 aaPredicted RBP8.63□□□□□ -1.03
SCARB2-224ENST00000640880 SLC4A10Q6U841 1118 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 MAGEB6Q8N7X4 407 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 EZH1Q92800 747 aaPredicted RBP8.63□□□□□ -1.03
SCARB2-224ENST00000640880 COX4I2Q96KJ9 171 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 ALG1Q9BT22 464 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 MENTQ9BUN1 341 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 GOLGA6AQ9NYA3 693 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 IP6K2Q9UHH9 426 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
SCARB2-224ENST00000640880 SHISA3A0PJX4 238 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 ARNTLO00327 626 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 MSCO60682 206 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 RFPL1O75677 317 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 CKMP06732 381 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 MYBL2P10244 700 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 PLS3P13797 630 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 RXRBP28702 533 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 LTBRP36941 435 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 SEPHS1P49903 392 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 PAK1Q13153 545 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 SFRP5Q5T4F7 317 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 SYCP2LQ5T4T6 812 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 LBX2Q6XYB7 198 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 HDGFL2Q7Z4V5 671 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-224ENST00000640880 C11orf74Q86VG3 221 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 CCDC103Q8IW40 242 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 PCDH19Q8TAB3 1148 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 CHTF18Q8WVB6 975 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 EMC7Q9NPA0 242 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 PRDM5Q9NQX1 630 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-224ENST00000640880 CLEC1BQ9P126 229 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 B4GALT6Q9UBX8 382 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 CFDP1Q9UEE9 299 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-224ENST00000640880 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
SCARB2-224ENST00000640880 RICTORQ6R327 1708 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 PLEKHH2Q8IVE3 1493 aa8.62□□□□□ -1.03
SCARB2-224ENST00000640880 ABCC1P33527 1531 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 GPATCH8Q9UKJ3 1502 aaKnown RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 GNB5O14775 395 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 LCP1P13796 627 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 IARSP41252 1262 aaKnown RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 OCRLQ01968 901 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 KCNAB2Q13303 367 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 TESK1Q15569 626 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 GRIK4Q16099 956 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 GFOD2Q3B7J2 385 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 SEZ6L2Q6UXD5 910 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 KSR2Q6VAB6 950 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 Q6ZS46 218 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 KSR1Q8IVT5 923 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 CBARPQ8N350 705 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 CHST14Q8NCH0 376 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 FCRL3Q96P31 734 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 MPHOSPH6Q99547 160 aaKnown RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 CELF4Q9BZC1 486 aaKnown RBP8.61□□□□□ -1.03
SCARB2-224ENST00000640880 VTA1Q9NP79 307 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 SPTLC3Q9NUV7 552 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 USP21Q9UK80 565 aa8.61□□□□□ -1.03
SCARB2-224ENST00000640880 ULK1O75385 1050 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 LEFTY1O75610 366 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 MT-CO1P00395 513 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 ATP2A2P16615 1042 aaKnown RBP8.6□□□□□ -1.03
SCARB2-224ENST00000640880 CCND1P24385 295 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 KIR3DL1P43629 444 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 NOP2P46087 812 aaKnown RBP8.6□□□□□ -1.03
SCARB2-224ENST00000640880 KPNA1P52294 538 aaPredicted RBP8.6□□□□□ -1.03
SCARB2-224ENST00000640880 OS9Q13438 667 aaPredicted RBP8.6□□□□□ -1.03
SCARB2-224ENST00000640880 TCIRG1Q13488 830 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 DIO2Q92813 273 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 FUBP3Q96I24 572 aaKnown RBP eCLIP8.6□□□□□ -1.032e-19■■■■■ 47.5
SCARB2-224ENST00000640880 FAM46AQ96IP4 442 aaKnown RBP8.6□□□□□ -1.03
SCARB2-224ENST00000640880 HDAC8Q9BY41 377 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 C1GALT1Q9NS00 363 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 COMMD10Q9Y6G5 202 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 SAMD9LQ8IVG5 1584 aa8.6□□□□□ -1.03
SCARB2-224ENST00000640880 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
SCARB2-224ENST00000640880 ZNF518AQ6AHZ1 1483 aa8.59□□□□□ -1.03
SCARB2-224ENST00000640880 K7ESF4 209 aa8.59□□□□□ -1.03
SCARB2-224ENST00000640880 SNUPNO95149 360 aaKnown RBP8.59□□□□□ -1.03
SCARB2-224ENST00000640880 DNM2P50570 870 aa8.59□□□□□ -1.03
SCARB2-224ENST00000640880 ERVK-21P61565 698 aa8.59□□□□□ -1.03
SCARB2-224ENST00000640880 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
SCARB2-224ENST00000640880 AHCYL2Q96HN2 611 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms