RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 KCNV1Q6PIU1 500 aa29.13■■■□□ 2.25
VEGFA-232ENST00000640653 SYNE3Q6ZMZ3 975 aa29.13■■■□□ 2.25
VEGFA-232ENST00000640653 SGMS1Q86VZ5 419 aa29.13■■■□□ 2.25
VEGFA-232ENST00000640653 PLEKHA8P1O95397 391 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 MMP3P08254 477 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 RXRAP19793 462 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 KRT32Q14532 448 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 NBPF20Q3BBV1 942 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 TSGA10IPQ3SY00 556 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 FAM47CQ5HY64 1035 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 NFRKBQ6P4R8 1299 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 VSIG10LQ86VR7 867 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 SRBD1Q8N5C6 995 aaKnown RBP29.12■■■□□ 2.25
VEGFA-232ENST00000640653 NOC4LQ9BVI4 516 aaKnown RBP29.12■■■□□ 2.25
VEGFA-232ENST00000640653 MTMR10Q9NXD2 777 aa29.12■■■□□ 2.25
VEGFA-232ENST00000640653 PTPN11Q06124 597 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-232ENST00000640653 LAMC2Q13753 1193 aa29.11■■■□□ 2.25
VEGFA-232ENST00000640653 PSRC1Q6PGN9 363 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-232ENST00000640653 CUL5Q93034 780 aa29.11■■■□□ 2.25
VEGFA-232ENST00000640653 EMID1Q96A84 441 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-232ENST00000640653 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.11■■■□□ 2.251e-12■■■□□ 14.7
VEGFA-232ENST00000640653 KIAA1217Q5T5P2 1943 aa29.11■■■□□ 2.25
VEGFA-232ENST00000640653 CASTP20810 708 aaKnown RBP29.1■■■□□ 2.25
VEGFA-232ENST00000640653 ZNF697Q5TEC3 545 aa29.1■■■□□ 2.25
VEGFA-232ENST00000640653 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
VEGFA-232ENST00000640653 TRMT13Q9NUP7 481 aaKnown RBP29.1■■■□□ 2.25
VEGFA-232ENST00000640653 BAZ2BQ9UIF8 2168 aaKnown RBP29.1■■■□□ 2.25
VEGFA-232ENST00000640653 DGKDQ16760 1214 aa29.09■■■□□ 2.25
VEGFA-232ENST00000640653 TMEM240Q5SV17 173 aa29.09■■■□□ 2.25
VEGFA-232ENST00000640653 DHX32Q7L7V1 743 aaKnown RBP29.09■■■□□ 2.25
VEGFA-232ENST00000640653 MICU3Q86XE3 530 aa29.09■■■□□ 2.25
VEGFA-232ENST00000640653 DHX37Q8IY37 1157 aaKnown RBP29.09■■■□□ 2.25
VEGFA-232ENST00000640653 IL31RAQ8NI17 732 aa29.09■■■□□ 2.25
VEGFA-232ENST00000640653 IL23AQ9NPF7 189 aa29.09■■■□□ 2.25
VEGFA-232ENST00000640653 RGS20O76081 388 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 TGFB3P10600 412 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 TMTC3Q6ZXV5 915 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 RAB11FIP4Q86YS3 637 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 RASEFQ8IZ41 740 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 CMTR1Q8N1G2 835 aaKnown RBP29.08■■■□□ 2.25
VEGFA-232ENST00000640653 PPTC7Q8NI37 304 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 UMODL1Q5DID0 1318 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 SCN10AQ9Y5Y9 1956 aa29.08■■■□□ 2.25
VEGFA-232ENST00000640653 STAM2O75886 525 aa29.07■■■□□ 2.24
VEGFA-232ENST00000640653 HMGB1P09429 215 aaKnown RBP29.07■■■□□ 2.24
VEGFA-232ENST00000640653 ACRP10323 421 aa29.07■■■□□ 2.24
VEGFA-232ENST00000640653 CCL23P55773 120 aa29.07■■■□□ 2.24
VEGFA-232ENST00000640653 EXOSC10Q01780 885 aaKnown RBP29.07■■■□□ 2.24
VEGFA-232ENST00000640653 FRMPD4Q14CM0 1322 aa29.07■■■□□ 2.24
VEGFA-232ENST00000640653 C16orf59Q7L2K0 433 aa29.07■■■□□ 2.24
VEGFA-232ENST00000640653 PIK3CDO00329 1044 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 CYP2C9P11712 490 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 CHMP4BP1P59074 171 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 ADCK5Q3MIX3 580 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 GNPTABQ3T906 1256 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 APOA5Q6Q788 366 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 ZNF365Q70YC5 407 aa29.06■■■□□ 2.24
VEGFA-232ENST00000640653 RBM28Q9NW13 759 aaKnown RBP29.06■■■□□ 2.24
VEGFA-232ENST00000640653 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-232ENST00000640653 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-232ENST00000640653 CELF3Q5SZQ8 465 aaKnown RBP29.05■■■□□ 2.24
VEGFA-232ENST00000640653 CCDC82Q8N4S0 544 aa29.05■■■□□ 2.24
VEGFA-232ENST00000640653 KATNAL1Q9BW62 490 aa29.05■■■□□ 2.24
VEGFA-232ENST00000640653 WNT8AQ9H1J5 351 aa29.05■■■□□ 2.24
VEGFA-232ENST00000640653 MTIF3Q9H2K0 278 aaKnown RBP29.05■■■□□ 2.24
VEGFA-232ENST00000640653 NOD1Q9Y239 953 aa29.05■■■□□ 2.24
VEGFA-232ENST00000640653 STXBP5LQ9Y2K9 1186 aa29.05■■■□□ 2.24
VEGFA-232ENST00000640653 GGPS1O95749 300 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 MYSM1Q5VVJ2 828 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 USP17L6PQ6QN14 398 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 RPUSD2Q8IZ73 545 aaKnown RBP29.04■■■□□ 2.24
VEGFA-232ENST00000640653 PPP1R13LQ8WUF5 828 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 TCEANC2Q96MN5 208 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 FAM161BQ96MY7 647 aa29.04■■■□□ 2.24
VEGFA-232ENST00000640653 MEIS2O14770 477 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 ZBTB43O43298 467 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 FGBP02675 491 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 SESTD1Q86VW0 696 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 KAT2BQ92831 832 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 ZFP91Q96JP5 570 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-232ENST00000640653 SPATA33Q96N06 139 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 PSTPIP2Q9H939 334 aa29.03■■■□□ 2.24
VEGFA-232ENST00000640653 UBA1P22314 1058 aaKnown RBP29.02■■■□□ 2.24
VEGFA-232ENST00000640653 MRPS9P82933 396 aaKnown RBP29.02■■■□□ 2.24
VEGFA-232ENST00000640653 RASIP1Q5U651 963 aa29.02■■■□□ 2.24
VEGFA-232ENST00000640653 XRRA1Q6P2D8 792 aa29.02■■■□□ 2.24
VEGFA-232ENST00000640653 HERVK_113Q902F9 699 aa29.02■■■□□ 2.24
VEGFA-232ENST00000640653 INPP4AQ96PE3 977 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-232ENST00000640653 MLXIPQ9HAP2 919 aa29.02■■■□□ 2.24
VEGFA-232ENST00000640653 LAMA2P24043 3122 aaKnown RBP29.01■■■□□ 2.24
VEGFA-232ENST00000640653 TMEM265A0A087WTH1 108 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 hCG_1642624A0A1W2PR95 340 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 PPFIA4O75335 1185 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 REC8O95072 547 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 FGD1P98174 961 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 SP2Q02086 613 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 RTN1Q16799 776 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 KCNB2Q92953 911 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 SCLYQ96I15 445 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms