RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 ZNF536O15090 1300 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 SMCO2A6NFE2 343 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 VWA5AO00534 786 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 AOC2O75106 756 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 ZBED4O75132 1171 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 MMP1P03956 469 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 CETPP11597 493 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 ALAS1P13196 640 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 ATP2B1P20020 1258 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 GTF2A2P52657 109 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 IRX3P78415 501 aaPredicted RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 KIF23Q02241 960 aaPredicted RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 FSTL1Q12841 308 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 RESTQ13127 1097 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 NPY5RQ15761 445 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 UBE2SQ16763 222 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 EARS2Q5JPH6 523 aaKnown RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 FASTKD5Q7L8L6 764 aaKnown RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 FAM43AQ8N2R8 423 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 ADAMTS19Q8TE59 1207 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 PHF20Q9BVI0 1012 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 AMNQ9BXJ7 453 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 R3HDMLQ9H3Y0 253 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 TFIP11Q9UBB9 837 aaKnown RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 BIN2Q9UBW5 565 aaPredicted RBP5.95□□□□□ -1.46
RTTN-219ENST00000640525 CCPG1Q9ULG6 757 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 AGTPBP1Q9UPW5 1226 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 RIPK3Q9Y572 518 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 PTPRFP10586 1907 aa5.95□□□□□ -1.46
RTTN-219ENST00000640525 UNCXA6NJT0 531 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 FAM155AB1AL88 458 aaPredicted RBP5.94□□□□□ -1.46
RTTN-219ENST00000640525 PDHXO00330 501 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 PLA2G6O60733 806 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 FBXO45P0C2W1 286 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 ZBTB48P10074 688 aaPredicted RBP5.94□□□□□ -1.46
RTTN-219ENST00000640525 XBP1P17861 261 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 HOXA13P31271 388 aaPredicted RBP5.94□□□□□ -1.46
RTTN-219ENST00000640525 KRT2P35908 639 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 CEBPZQ03701 1054 aaKnown RBP5.94□□□□□ -1.46
RTTN-219ENST00000640525 TRIM32Q13049 653 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 TMEM132BQ14DG7 1078 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 MUM1L1Q5H9M0 696 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 JAKMIP3Q5VZ66 844 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 USP17L6PQ6QN14 398 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 FTOQ9C0B1 505 aaKnown RBP eCLIP5.94□□□□□ -1.46
RTTN-219ENST00000640525 SLC38A10Q9HBR0 1119 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 BTBD7Q9P203 1132 aa5.94□□□□□ -1.46
RTTN-219ENST00000640525 LOC285556D6RIA3 1793 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 IGF2BP3O00425 579 aaKnown RBP eCLIP5.93□□□□□ -1.46
RTTN-219ENST00000640525 OPLAHO14841 1288 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 NCLP19338 710 aaKnown RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 HOXA7P31268 230 aaPredicted RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 ADCY7P51828 1080 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 HERVK_113P62684 666 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 DNM1Q05193 864 aaKnown RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 SAFBQ15424 915 aaKnown RBP eCLIP5.93□□□□□ -1.46
RTTN-219ENST00000640525 SNRNP48Q6IEG0 339 aaKnown RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 BLIDQ8IZY5 108 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 REPS2Q8NFH8 660 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 CCDC148Q8NFR7 591 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PSTPIP2Q9H939 334 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 C6orf50Q9HD87 102 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 TXNRD2Q9NNW7 524 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 HOXC10Q9NYD6 342 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PCDHA6Q9UN73 950 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PCDHA4Q9UN74 947 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 SMCHD1A6NHR9 2005 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 RLFQ13129 1914 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 NFIBO00712 420 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 WNT7AO00755 349 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 CNMDO75829 334 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 CFBP00751 764 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 ICAM1P05362 532 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 UBXN2AP68543 259 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 DEFB115Q30KQ5 88 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PIK3AP1Q6ZUJ8 805 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 FCHSD1Q86WN1 690 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 TRERF1Q96PN7 1200 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 ZMYND12Q9H0C1 365 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 SH3GLB2Q9NR46 395 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 RBPJLQ9UBG7 517 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 ZNF214Q9UL59 606 aaPredicted RBP5.93□□□□□ -1.46
RTTN-219ENST00000640525 ADAMTS5Q9UNA0 930 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 CNPY2Q9Y2B0 182 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 PARP14Q460N5 1801 aa5.93□□□□□ -1.46
RTTN-219ENST00000640525 COL11A1P12107 1806 aaPredicted RBP5.92□□□□□ -1.46
RTTN-219ENST00000640525 MANSC4A6NHS7 340 aaPredicted RBP5.92□□□□□ -1.46
RTTN-219ENST00000640525 BAG4O95429 457 aaKnown RBP5.92□□□□□ -1.46
RTTN-219ENST00000640525 CALML3P27482 149 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 STAT3P40763 770 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 PABPC4Q13310 644 aaKnown RBP eCLIP5.92□□□□□ -1.46
RTTN-219ENST00000640525 NFKBIBQ15653 356 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 WDR78Q5VTH9 848 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 NSMFQ6X4W1 530 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 LBX2Q6XYB7 198 aa5.92□□□□□ -1.46
RTTN-219ENST00000640525 ANKRD23Q86SG2 305 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms