RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
SPIN3-240ENST00000640507 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
SPIN3-240ENST00000640507 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
SPIN3-240ENST00000640507 MYH6P13533 1939 aa18.25■□□□□ 0.51
SPIN3-240ENST00000640507 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
SPIN3-240ENST00000640507 RGS20O76081 388 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 FPGSQ05932 587 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 ARHGAP1Q07960 439 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 C9orf50Q5SZB4 431 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 KCNV1Q6PIU1 500 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 CCDC82Q8N4S0 544 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
SPIN3-240ENST00000640507 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
SPIN3-240ENST00000640507 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 MEIS2O14770 477 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 B4GALT4O60513 344 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 TGFB3P10600 412 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 CCND2P30279 289 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 IL31RAQ8NI17 732 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 AFG1LQ8WV93 481 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 CUL5Q93034 780 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 EMID1Q96A84 441 aaPredicted RBP18.23■□□□□ 0.51
SPIN3-240ENST00000640507 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
SPIN3-240ENST00000640507 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 ZBTB43O43298 467 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 EPHB4P54760 987 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 LAMC2Q13753 1193 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 USP17L6PQ6QN14 398 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 TMEM199Q8N511 208 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 SMARCC2Q8TAQ2 1214 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 TRPV6Q9H1D0 765 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 LAMA3Q16787 3333 aa18.23■□□□□ 0.51
SPIN3-240ENST00000640507 STAM2O75886 525 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 MMP3P08254 477 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 SUPT20HL2P0C7V6 817 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
SPIN3-240ENST00000640507 RCAN1P53805 252 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 RTN1Q16799 776 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 NBPF20Q3BBV1 942 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 NFRKBQ6P4R8 1299 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 DHX37Q8IY37 1157 aaKnown RBP18.22■□□□□ 0.51
SPIN3-240ENST00000640507 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
SPIN3-240ENST00000640507 PPP1R12CQ9BZL4 782 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 PSTPIP2Q9H939 334 aa18.22■□□□□ 0.51
SPIN3-240ENST00000640507 KLF18A0A0U1RQI7 1052 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 hCG_1642624A0A1W2PR95 340 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-240ENST00000640507 CPA1P15085 419 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 MRPS9P82933 396 aaKnown RBP18.21■□□□□ 0.51
SPIN3-240ENST00000640507 FGD1P98174 961 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 PTPN11Q06124 597 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-240ENST00000640507 PPIGQ13427 754 aaKnown RBP eCLIP18.21■□□□□ 0.51
SPIN3-240ENST00000640507 DGKDQ16760 1214 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 MYSM1Q5VVJ2 828 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
SPIN3-240ENST00000640507 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 PSMA5P28066 241 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 CYP2C18P33260 490 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 SP2Q02086 613 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 FUT2Q10981 343 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 GNPTABQ3T906 1256 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
SPIN3-240ENST00000640507 XRRA1Q6P2D8 792 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 Q6ZUG5 572 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 PPTC7Q8NI37 304 aa18.2■□□□□ 0.5
SPIN3-240ENST00000640507 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
SPIN3-240ENST00000640507 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
SPIN3-240ENST00000640507 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
SPIN3-240ENST00000640507 CNTNAP5Q8WYK1 1306 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 GOLGA8AA7E2F4 631 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 PPFIA4O75335 1185 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 CSF2RAP15509 400 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 ICAM3P32942 547 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 FAM47CQ5HY64 1035 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 PCNX4Q63HM2 1172 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 C16orf59Q7L2K0 433 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 KAT2BQ92831 832 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 INPP4AQ96PE3 977 aaPredicted RBP18.19■□□□□ 0.5
SPIN3-240ENST00000640507 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
SPIN3-240ENST00000640507 AGXT2Q9BYV1 514 aa18.19■□□□□ 0.5
SPIN3-240ENST00000640507 V9GY48 417 aaPredicted RBP18.19■□□□□ 0.5
SPIN3-240ENST00000640507 GGPS1O95749 300 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 CDC27P30260 824 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 HEATR3Q7Z4Q2 680 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.5
SPIN3-240ENST00000640507 BRF1Q92994 677 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
SPIN3-240ENST00000640507 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.5
SPIN3-240ENST00000640507 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
SPIN3-240ENST00000640507 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
SPIN3-240ENST00000640507 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
SPIN3-240ENST00000640507 HOXD8P13378 290 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms