RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 CEP104O60308 925 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PPFIA3O75145 1194 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 KRT2P35908 639 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PDE4DQ08499 809 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 MAP7Q14244 749 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 ELF2Q15723 593 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PDCD2Q16342 344 aaPredicted RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 CAMK4Q16566 473 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 FAM110CQ1W6H9 321 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 ADGRA1Q86SQ6 560 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PAF1Q8N7H5 531 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 RAET1EQ8TD07 263 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 CNKSR2Q8WXI2 1034 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 TMX3Q96JJ7 454 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PLIN4Q96Q06 1357 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CFBP00751 764 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 SLC10A3P09131 477 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 HERVK_113P62684 666 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 MXRA7P84157 204 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 TERF2Q15554 542 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 PPFIBP2Q8ND30 876 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 NEK11Q8NG66 645 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 WHAMMQ8TF30 809 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 AP5M1Q9H0R1 490 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CASZ1Q86V15 1759 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 ESYT2A0FGR8 921 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 ATP2C2O75185 946 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 STAM2O75886 525 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 HOXA7P31268 230 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 DSG3P32926 999 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CTCFP49711 727 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 SP3Q02447 781 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CDC37Q16543 378 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 SNRNP48Q6IEG0 339 aaKnown RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 RASEFQ8IZ41 740 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CACNA2D3Q8IZS8 1091 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 GBP7Q8N8V2 638 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 TCEANC2Q96MN5 208 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 TMEM106CQ9BVX2 250 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 PDHXO00330 501 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 MAFGO15525 162 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 PAFAH1B1P43034 410 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 MAATS1Q7Z4T9 603 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 SAPCD2Q86UD0 394 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CCDC160A6NGH7 325 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 IRF6O14896 467 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 MSCO60682 206 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 EXOC8Q8IYI6 725 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 TEPSINQ96N21 525 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 NAP1L3Q99457 506 aaPredicted RBP6.29□□□□□ -1.4
RTTN-218ENST00000640408 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 CAPN7Q9Y6W3 813 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 LAMB2P55268 1798 aa6.29□□□□□ -1.4
RTTN-218ENST00000640408 SMCO2A6NFE2 343 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 TRAF5O00463 557 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 VCAM1P19320 739 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 PEX19P40855 299 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ME1P48163 572 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 EXOSC10Q01780 885 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 RNF207Q6ZRF8 634 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 DTNBP1Q96EV8 351 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 JPH2Q9BR39 696 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 SNCAIPQ9Y6H5 919 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 CREB3O43889 395 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 PFDN1O60925 122 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ITGBL1O95965 494 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 PDHBP11177 359 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 PTGS1P23219 599 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 EVCP57679 992 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 PKN2Q16513 984 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 ARHGEF16Q5VV41 709 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 BTNL9Q6UXG8 535 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ZBTB9Q96C00 473 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 CABS1Q96KC9 395 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 TRIM6Q9C030 488 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 SLC15A5A6NIM6 579 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 TACC1O75410 805 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 DESP17661 470 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 HNRNPH2P55795 449 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 MKRN3Q13064 507 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 CCDC174Q6PII3 467 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ABRAQ8N0Z2 381 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 ELP1O95163 1332 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 LRRD1A4D1F6 860 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 RASSF10A6NK89 507 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 MYO1CO00159 1063 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms