RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CCDC144BQ3MJ40 725 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 PCNX4Q63HM2 1172 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 GALNT17Q6IS24 598 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 SEPT14Q6ZU15 432 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 DIS3L2Q8IYB7 885 aaKnown RBP15.09■□□□□ 0.01
GTF3A-209ENST00000640289 DEFB118Q96PH6 123 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 EHMT1Q9H9B1 1298 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 FAM205CA6NFA0 338 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 BTBD18B2RXH4 712 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0
GTF3A-209ENST00000640289 AKR1A1P14550 325 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 KRT2P35908 639 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 SREBF1P36956 1147 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 ARHGAP4P98171 946 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 EARS2Q5JPH6 523 aaKnown RBP15.08■□□□□ 0
GTF3A-209ENST00000640289 SPRYD3Q8NCJ5 442 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
GTF3A-209ENST00000640289 DDX20Q9UHI6 824 aaKnown RBP15.08■□□□□ 0
GTF3A-209ENST00000640289 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 LRRC37A2A6NM11 1700 aa15.08■□□□□ 0
GTF3A-209ENST00000640289 RBM47A0AV96 593 aaKnown RBP15.07■□□□□ 0
GTF3A-209ENST00000640289 EDIL3O43854 480 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 ARIH2O95376 493 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 SMPD1P17405 629 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 GJC2Q5T442 439 aaPredicted RBP15.07■□□□□ 0
GTF3A-209ENST00000640289 LHX8Q68G74 356 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 MCTP2Q6DN12 878 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 PIK3AP1Q6ZUJ8 805 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 TBCKQ8TEA7 893 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 CRYGNQ8WXF5 182 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 TNFRSF25Q93038 417 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 TMEM106CQ9BVX2 250 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 WDR11Q9BZH6 1224 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 BRMS1Q9HCU9 246 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 KIF3AQ9Y496 699 aa15.07■□□□□ 0
GTF3A-209ENST00000640289 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 POTEFA5A3E0 1075 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 CCDC85CA6NKD9 419 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 KIF28PB7ZC32 967 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 GJB1P08034 283 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 ITGB5P18084 799 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 TNFAIP2Q03169 654 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 NONOQ15233 471 aaKnown RBP eCLIP15.06■□□□□ 0
GTF3A-209ENST00000640289 LY6KQ17RY6 165 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 INF2Q27J81 1249 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
GTF3A-209ENST00000640289 XRRA1Q6P2D8 792 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 CYP2W1Q8TAV3 490 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 U2AF1L4Q8WU68 220 aaKnown RBP15.06■□□□□ 0
GTF3A-209ENST00000640289 COPS5Q92905 334 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 INPP4AQ96PE3 977 aaPredicted RBP15.06■□□□□ 0
GTF3A-209ENST00000640289 UBIAD1Q9Y5Z9 338 aa15.06■□□□□ 0
GTF3A-209ENST00000640289 STAM2O75886 525 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 SGPL1O95470 568 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
GTF3A-209ENST00000640289 CYP3A4P08684 503 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 TXNP10599 105 aaKnown RBP15.05■□□□□ -0
GTF3A-209ENST00000640289 RARBP10826 455 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 SOX10P56693 466 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 IRX5P78411 483 aaPredicted RBP15.05■□□□□ -0
GTF3A-209ENST00000640289 SEMA3FQ13275 785 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 TTLL4Q14679 1199 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 SAFBQ15424 915 aaKnown RBP eCLIP15.05■□□□□ -0
GTF3A-209ENST00000640289 IQSEC1Q6DN90 963 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 SCFD2Q8WU76 684 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 MXRA8Q9BRK3 442 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 GNEQ9Y223 722 aaKnown RBP15.05■□□□□ -0
GTF3A-209ENST00000640289 MRVI1Q9Y6F6 885 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 MCM3APO60318 1980 aa15.05■□□□□ -0
GTF3A-209ENST00000640289 FAM86B1E9PN63 330 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 H3BQV1 296 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 SORBS3O60504 671 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 MSCO60682 206 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 PGK1P00558 417 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 FAM86B2P0C5J1 330 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 ZNF76P36508 570 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 GJA8P48165 433 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 SP2Q02086 613 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 DUSP28Q4G0W2 176 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 CEP55Q53EZ4 464 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 IFFO2Q5TF58 517 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 CCDC62Q6P9F0 684 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 NLRX1Q86UT6 975 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 BCAS3Q9H6U6 928 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 JADE2Q9NQC1 790 aa15.04■□□□□ -0
GTF3A-209ENST00000640289 DDX41Q9UJV9 622 aaKnown RBP15.04■□□□□ -0
GTF3A-209ENST00000640289 SYNRGQ9UMZ2 1314 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 IGLV3-22A0A075B6J6 115 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 MYADML2A6NDP7 307 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 SPATA31C2B4DYI2 1134 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 DYNC1LI2O43237 492 aaPredicted RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 FIBPO43427 364 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 DUSP11O75319 330 aaKnown RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 TDP2O95551 362 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 ARP10275 920 aa15.03■□□□□ -0
GTF3A-209ENST00000640289 EN2P19622 333 aaPredicted RBP15.03■□□□□ -0
GTF3A-209ENST00000640289 ICAM3P32942 547 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms