RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	NUDT12	Q9BQG2	462 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	SPATC1L	Q9H0A9	340 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	ACAD9	Q9H845	621 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	A1CF	Q9NQ94	594 aa	Known RBP	11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	PARP14	Q460N5	1801 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	SLFN14	P0C7P3	912 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PRR29	P0C7W0	189 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CETP	P11597	493 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	MYCL	P12524	364 aa	Predicted RBP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	XRCC6	P12956	609 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	OSBP	P22059	807 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	GTF2A2	P52657	109 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	GHRHR	Q02643	423 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PDIA5	Q14554	519 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	E2F4	Q16254	413 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CEP55	Q53EZ4	464 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	SPRYD7	Q5W111	196 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CABP7	Q86V35	215 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	NCAPG2	Q86XI2	1143 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	TEX2	Q8IWB9	1127 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CEP57L1	Q8IYX8	460 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	IQUB	Q8NA54	791 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	BRI3BP	Q8WY22	251 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	AK8	Q96MA6	479 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	MMTAG2	Q9BU76	263 aa	Known RBP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	EHMT1	Q9H9B1	1298 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	MAP3K20	Q9NYL2	800 aa	Known RBP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CYP39A1	Q9NYL5	469 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PCDHA5	Q9Y5H7	936 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	BTBD19	C9JJ37	291 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PDHX	O00330	501 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CNMD	O75829	334 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	AR	P10275	920 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	ITGB5	P18084	799 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	POSTN	Q15063	836 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	ANO6	Q4KMQ2	910 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	ARHGEF16	Q5VV41	709 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	RRAGB	Q5VZM2	374 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PLA2G4D	Q86XP0	818 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	ANKRD35	Q8N283	1001 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	MB21D1	Q8N884	522 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	LRRC15	Q8TF66	581 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	PAGE5	Q96GU1	130 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	WDR11	Q9BZH6	1224 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	CCSER1	Q9C0I3	900 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	DISC1	Q9NRI5	854 aa		11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	COL11A1	P12107	1806 aa	Predicted RBP	11.8	□□□□□ -0.52
NECAP1-223	ENST00000640091	STAT6	P42226	847 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	ZNF157	P51786	506 aa	Predicted RBP	11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	MRPS9	P82933	396 aa	Known RBP	11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	PGM5	Q15124	567 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	NAALADL2	Q58DX5	795 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	RIOX2	Q8IUF8	465 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	SLFN12	Q8IYM2	578 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	MTR	Q99707	1265 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	PTPN18	Q99952	460 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	RAB34	Q9BZG1	259 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	DNAJC25	Q9H1X3	360 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	PXMP2	Q9NR77	195 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	PKD2L1	Q9P0L9	805 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	CCDC39	Q9UFE4	941 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	RPTOR	Q8N122	1335 aa		11.79	□□□□□ -0.52
NECAP1-223	ENST00000640091	MEIS1	O00470	390 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	PLCG1	P19174	1290 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	ERCC3	P19447	782 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	MRE11	P49959	708 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	ECM1	Q16610	540 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	TKFC	Q3LXA3	575 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	PDXDC2P	Q6P474	469 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	SAPCD2	Q86UD0	394 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	FAM43A	Q8N2R8	423 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	CHST13	Q8NET6	341 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	MXRA8	Q9BRK3	442 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	PDCD2L	Q9BRP1	358 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	BLZF1	Q9H2G9	400 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	TBX3	O15119	743 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	CNTN2	Q02246	1040 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	DHX8	Q14562	1220 aa	Known RBP	11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	KRT79	Q5XKE5	535 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	PCNX4	Q63HM2	1172 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	KANK3	Q6NY19	840 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	SAMD3	Q8N6K7	520 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	SNX29	Q8TEQ0	813 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	FAM20A	Q96MK3	541 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	KCNH7	Q9NS40	1196 aa		11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	HOOK1	Q9UJC3	728 aa	Known RBP	11.78	□□□□□ -0.52
NECAP1-223	ENST00000640091	KIF3C	O14782	793 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	NR3C2	P08235	984 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	ZBTB48	P10074	688 aa	Predicted RBP	11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	SPIRE1	Q08AE8	756 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	GRB10	Q13322	594 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	WDR78	Q5VTH9	848 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	NCAPH2	Q6IBW4	605 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	SH3RF1	Q7Z6J0	888 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	CALML4	Q96GE6	196 aa		11.77	□□□□□ -0.52
NECAP1-223	ENST00000640091	PNMA5	Q96PV4	448 aa		11.77	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms