RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 GRAPLQ8TC17 118 aaPredicted RBP9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 PPM1EQ8WY54 764 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 CCDC77Q9BR77 488 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 AMNQ9BXJ7 453 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 IMPG2Q9BZV3 1241 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
HNRNPU-222ENST00000639880 TCHHQ07283 1943 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 NTRK3Q16288 839 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 UBL4BQ8N7F7 174 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 NSRP1Q9H0G5 558 aaKnown RBP9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 ASIC3Q9UHC3 531 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 TFR2Q9UP52 801 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 PLA2G4BP0C869 781 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 BCRP11274 1271 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 VSNL1P62760 191 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 CCDC127Q96BQ5 260 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 FNBP1Q96RU3 617 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 SH3GLB2Q9NR46 395 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 RABGAP1Q9Y3P9 1069 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 LRRC53A6NM62 1247 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 ORC4O43929 436 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 TDP2O95551 362 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 GYPCP04921 128 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 ATP1A1P05023 1023 aaKnown RBP9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 DESP17661 470 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 SMTNP53814 917 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 TROAPQ12815 778 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 ODR4Q5SWX8 454 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 AGPAT5Q9NUQ2 364 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 NARFQ9UHQ1 456 aa9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
HNRNPU-222ENST00000639880 SLIT1O75093 1534 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 H0YIN7 160 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 LRRN2O75325 713 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 RPS6KA4O75676 772 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 CAMTA2O94983 1202 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 STMN4Q9H169 189 aaPredicted RBP9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 CD209Q9NNX6 404 aa9.21□□□□□ -0.93
HNRNPU-222ENST00000639880 E9PMD0 336 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 PRPF6O94906 941 aaKnown RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 ALDH1B1P30837 517 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 HOXA13P31271 388 aaPredicted RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 GFPT1Q06210 699 aaPredicted RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 ABCB5Q2M3G0 1257 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 C12orf60Q5U649 245 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 GOLGA8KD6RF30 607 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 NCK2O43639 380 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 VPS41P49754 854 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 LRRC63Q05C16 580 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 STK4Q13043 487 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 GRM4Q14833 912 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 NKX1-1Q15270 411 aaPredicted RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 BHMT2Q9H2M3 363 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 METTL14Q9HCE5 456 aaKnown RBP9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 PCDHA6Q9UN73 950 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 PCDHA8Q9Y5H6 950 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 IKBKGQ9Y6K9 419 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 RIMBP3CA6NJZ7 1639 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 RIMBP3BA6NNM3 1639 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 RIMBP3Q9UFD9 1639 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 RICTORQ6R327 1708 aa9.21□□□□□ -0.94
HNRNPU-222ENST00000639880 BBOX1O75936 387 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 KLRK1P26718 216 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 EPHB4P54760 987 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 ITPK1Q13572 414 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 CLEC10AQ8IUN9 316 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 PPM1KQ8N3J5 372 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 LARGE2Q8N3Y3 721 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 LRRN4CLQ8ND94 238 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 TRIM9Q9C026 710 aa9.2□□□□□ -0.94
HNRNPU-222ENST00000639880 SH2D4AQ9H788 454 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms