RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 TGFB3P10600 412 aa20.42■□□□□ 0.86
PTPN11-207ENST00000639857 PSMA5P28066 241 aa20.42■□□□□ 0.86
PTPN11-207ENST00000639857 CCND2P30279 289 aa20.42■□□□□ 0.86
PTPN11-207ENST00000639857 RTN1Q16799 776 aa20.42■□□□□ 0.86
PTPN11-207ENST00000639857 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
PTPN11-207ENST00000639857 JAKMIP1Q96N16 626 aaKnown RBP20.42■□□□□ 0.86
PTPN11-207ENST00000639857 TIMP1P01033 207 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 FGD1P98174 961 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 ARHGAP1Q07960 439 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 FCHSD1Q86WN1 690 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 PIBF1Q8WXW3 757 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 COPS5Q92905 334 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 TCEANC2Q96MN5 208 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 DDX41Q9UJV9 622 aaKnown RBP20.41■□□□□ 0.86
PTPN11-207ENST00000639857 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 MRVI1Q9Y6F6 885 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 GRIN2DO15399 1336 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 CNTNAP5Q8WYK1 1306 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 NID2Q14112 1375 aa20.41■□□□□ 0.86
PTPN11-207ENST00000639857 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 hCG_1984214I3L0E3 225 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 MYL3P08590 195 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 ITGB8P26012 769 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 XRRA1Q6P2D8 792 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 NFRKBQ6P4R8 1299 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 CMTR1Q8N1G2 835 aaKnown RBP20.4■□□□□ 0.86
PTPN11-207ENST00000639857 ZNF713Q8N859 430 aaPredicted RBP20.4■□□□□ 0.86
PTPN11-207ENST00000639857 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
PTPN11-207ENST00000639857 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 GOLGA8AA7E2F4 631 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 GOLGA8BA8MQT2 603 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 MEIS2O14770 477 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 RGS20O76081 388 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 MMP3P08254 477 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 MYCLP12524 364 aaPredicted RBP20.39■□□□□ 0.85
PTPN11-207ENST00000639857 FPGSQ05932 587 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 PTPN11Q06124 597 aaPredicted RBP20.39■□□□□ 0.85
PTPN11-207ENST00000639857 LAMC2Q13753 1193 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 LY6KQ17RY6 165 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 GNPTABQ3T906 1256 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 MFSD5Q6N075 450 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 PPP1R18Q6NYC8 613 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 RAB11FIP4Q86YS3 637 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 IL31RAQ8NI17 732 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
PTPN11-207ENST00000639857 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
PTPN11-207ENST00000639857 SUPT20HL2P0C7V6 817 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 RPS6KB1P23443 525 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 PSMC6P62333 389 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 FUT2Q10981 343 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 PPTC7Q8NI37 304 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 AFG1LQ8WV93 481 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 INPP4AQ96PE3 977 aaPredicted RBP20.38■□□□□ 0.85
PTPN11-207ENST00000639857 ALDH8A1Q9H2A2 487 aaPredicted RBP20.38■□□□□ 0.85
PTPN11-207ENST00000639857 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
PTPN11-207ENST00000639857 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 B4GALT4O60513 344 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 HOXD8P13378 290 aaPredicted RBP20.37■□□□□ 0.85
PTPN11-207ENST00000639857 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
PTPN11-207ENST00000639857 ICAM3P32942 547 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 DGKDQ16760 1214 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 PCNX4Q63HM2 1172 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 Q6ZUG5 572 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 TMEM199Q8N511 208 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 PCDH10Q9P2E7 1040 aa20.37■□□□□ 0.85
PTPN11-207ENST00000639857 METAP2P50579 478 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN11-207ENST00000639857 PPIGQ13427 754 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN11-207ENST00000639857 USP17L6PQ6QN14 398 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 SESTD1Q86VW0 696 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 DHX37Q8IY37 1157 aaKnown RBP20.36■□□□□ 0.85
PTPN11-207ENST00000639857 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 BRF1Q92994 677 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 KATNAL1Q9BW62 490 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 DOCK5Q9H7D0 1870 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 SZT2Q5T011 3432 aa20.36■□□□□ 0.85
PTPN11-207ENST00000639857 FIBPO43427 364 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
PTPN11-207ENST00000639857 UBA1P22314 1058 aaKnown RBP20.35■□□□□ 0.85
PTPN11-207ENST00000639857 EVCP57679 992 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 MRPS9P82933 396 aaKnown RBP20.35■□□□□ 0.85
PTPN11-207ENST00000639857 SHHQ15465 462 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 NBPF20Q3BBV1 942 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 CELF3Q5SZQ8 465 aaKnown RBP20.35■□□□□ 0.85
PTPN11-207ENST00000639857 MYSM1Q5VVJ2 828 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 LRCH3Q96II8 777 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 TM6SF1Q9BZW5 370 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 GLT8D2Q9H1C3 349 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 HIPK3Q9H422 1215 aa20.35■□□□□ 0.85
PTPN11-207ENST00000639857 FAM217BQ9NTX9 383 aaPredicted RBP20.35■□□□□ 0.85
PTPN11-207ENST00000639857 SPDYE3A6NKU9 549 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 PPFIA4O75335 1185 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 CPA1P15085 419 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 APOBRQ0VD83 1088 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 C9orf50Q5SZB4 431 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 WWC2Q6AWC2 1192 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 NOC4LQ9BVI4 516 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms