RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 E7EVH7 732 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 MIGA2Q7L4E1 593 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
SCARB2-216ENST00000639300 VTI1AQ96AJ9 217 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 BHMT2Q9H2M3 363 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 AZI2Q9H6S1 392 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 BCAS4Q8TDM0 211 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 IWS1Q96ST2 819 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 TMEM260Q9NX78 707 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 GTF2A1P52655 376 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 SEPT12Q8IYM1 358 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PSMD1Q99460 953 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 CEP170BQ9Y4F5 1589 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 UTYO14607 1347 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 MMP10P09238 476 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 DEPTORQ8TB45 409 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 ZNF577Q9BSK1 485 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PCIF1Q9H4Z3 704 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 SUGCTQ9HAC7 445 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 SALL3Q9BXA9 1300 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PRPF6O94906 941 aaKnown RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 MTF1Q14872 753 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 CDC37Q16543 378 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 OTUD6AQ7L8S5 288 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 ZNF354CQ86Y25 554 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PLA2G12BQ9BX93 195 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 IRX2Q9BZI1 471 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-216ENST00000639300 THAP9Q9H5L6 903 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PNMA6FA0A0J9YX94 578 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 C2orf54Q08AI8 447 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PAGR1Q9BTK6 254 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 FAN1Q9Y2M0 1017 aa15.8■□□□□ 0.12
SCARB2-216ENST00000639300 PNMA6AP0CW24 399 aaPredicted RBP15.79■□□□□ 0.12
SCARB2-216ENST00000639300 KIF11P52732 1056 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 MESDQ14696 234 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 MGARPQ8TDB4 240 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 MTA3Q9BTC8 594 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 RAB17Q9H0T7 212 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 FAM204AQ9H8W3 233 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 EPB41L5Q9HCM4 733 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
SCARB2-216ENST00000639300 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 UBE2Q2LH0YL09 131 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 TNFAIP1Q13829 316 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 BPIFA3Q9BQP9 254 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 ST7Q9NRC1 585 aa15.79■□□□□ 0.12
SCARB2-216ENST00000639300 FBXO2Q9UK22 296 aaPredicted RBP15.79■□□□□ 0.12
SCARB2-216ENST00000639300 SRGAP2O75044 1071 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 COMMD10Q9Y6G5 202 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 PNPLA7Q6ZV29 1317 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 GFPT2O94808 682 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 GAS8O95995 478 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 GH2P01242 217 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 AFPP02771 609 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 LIG4P49917 911 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 SLC7A5Q01650 507 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 DENND2CQ68D51 928 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 NSUN4Q96CB9 384 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 TXNDC16Q9P2K2 825 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 HEXIM1O94992 359 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 KSR1Q8IVT5 923 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 POMGNT1Q8WZA1 660 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 COA1Q9GZY4 146 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 GYS2P54840 703 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 CCDC170Q8IYT3 715 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 TSNARE1Q96NA8 513 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 DHX36Q9H2U1 1008 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 ABCB6Q9NP58 842 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 MED4Q9NPJ6 270 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.78■□□□□ 0.12
SCARB2-216ENST00000639300 ABHD10Q9NUJ1 306 aa15.78■□□□□ 0.12
SCARB2-216ENST00000639300 TTC26A0AVF1 554 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 LRRIQ4A6NIV6 560 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 C6orf163Q5TEZ5 329 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 PIGOQ8TEQ8 1089 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 FAM184BQ9ULE4 1060 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 LGALS16A8MUM7 142 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 IRX3P78415 501 aaPredicted RBP15.77■□□□□ 0.12
SCARB2-216ENST00000639300 FMR1Q06787 632 aaKnown RBP eCLIP15.77■□□□□ 0.12
SCARB2-216ENST00000639300 CTTNQ14247 550 aaKnown RBP15.77■□□□□ 0.12
SCARB2-216ENST00000639300 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 ANKRD42Q8N9B4 389 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 JRKLQ9Y4A0 524 aa15.77■□□□□ 0.12
SCARB2-216ENST00000639300 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.11
SCARB2-216ENST00000639300 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.11
SCARB2-216ENST00000639300 USP17L10C9JJH3 530 aa15.77■□□□□ 0.11
SCARB2-216ENST00000639300 HNRNPDLO14979 420 aaKnown RBP15.77■□□□□ 0.11
SCARB2-216ENST00000639300 RGS16O15492 202 aaPredicted RBP15.77■□□□□ 0.11
SCARB2-216ENST00000639300 RCAN1P53805 252 aa15.77■□□□□ 0.11
SCARB2-216ENST00000639300 SETDB1Q15047 1291 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms