RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	TRMT2B	Q96GJ1	504 aa	Known RBP	4.95	□□□□□ -1.62
HNRNPU-215	ENST00000638589	MCOLN1	Q9GZU1	580 aa		4.95	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PDLIM7	Q9NR12	457 aa		4.95	□□□□□ -1.62
HNRNPU-215	ENST00000638589	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-215	ENST00000638589	NPFFR2	Q9Y5X5	522 aa		4.95	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SLC27A2	O14975	620 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	RAC2	P15153	192 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PDE6A	P16499	860 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	LTBR	P36941	435 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	WWC2	Q6AWC2	1192 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SH3RF2	Q8TEC5	729 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CLEC4D	Q8WXI8	215 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	GCM1	Q9NP62	436 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TNFRSF12A	Q9NP84	129 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PRR13	Q9NZ81	148 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	RNF114	Q9Y508	228 aa		4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TNPO3	Q9Y5L0	923 aa	Known RBP	4.94	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ETV2	O00321	342 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SOD2	P04179	222 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KCNA6	P17658	529 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KIR2DL1	P43626	348 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KIR2DL2	P43627	348 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	AFM	P43652	599 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	JAM2	P57087	298 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SSPN	Q14714	243 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PCDH19	Q8TAB3	1148 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	THAP3	Q8WTV1	239 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ZSWIM3	Q96MP5	696 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TRIM39	Q9HCM9	518 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ACSL6	Q9UKU0	697 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PALD1	Q9ULE6	856 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PRDM2	Q13029	1718 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589		A0A1B0GTL3	188 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SRSF3	P84103	164 aa	Known RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	RTP5	Q14D33	572 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	NFE2L2	Q16236	605 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	STYK1	Q6J9G0	422 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	LBX2	Q6XYB7	198 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SCUBE1	Q8IWY4	988 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SGSM3	Q96HU1	749 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TMEM260	Q9NX78	707 aa		4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-215	ENST00000638589	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KPNA6	O60684	536 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	DNAJC8	O75937	253 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	JMJD7	P0C870	316 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ATF2	P15336	505 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	NR0B2	Q15466	257 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	DALRD3	Q5D0E6	543 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CNNM4	Q6P4Q7	775 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	NXPE1	Q8N323	547 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	JMY	Q8N9B5	988 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	IGSF22	Q8N9C0	903 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	EPN3	Q9H201	632 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	DBR1	Q9UK59	544 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	C1QTNF9	P0C862	333 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PML	P29590	882 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	MESP2	Q0VG99	397 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	MAP4K2	Q12851	820 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CYP2R1	Q6VVX0	501 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PTRH1	Q86Y79	214 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	DDX11	Q96FC9	970 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	MMP19	Q99542	508 aa		4.92	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CCDC88B	A6NC98	1476 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KRT37	O76014	449 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	AMY2A	P04746	511 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	AMY2B	P19961	511 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	GRK2	P25098	689 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	GRK3	P35626	688 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CHRNE	Q04844	493 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SPPL2C	Q8IUH8	684 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PTPRN2	Q92932	1015 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	KCNN1	Q92952	543 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CNTD2	Q9H8S5	307 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SFMBT1	Q9UHJ3	866 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TCRBV16S1A1N1	A0A5B0	115 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	IQCA1L	A6NCM1	817 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ZNF891	A8MT65	544 aa	Predicted RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CP	P00450	1065 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	SMAD4	Q13485	552 aa	Known RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	GALNT18	Q6P9A2	607 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	IGDCC3	Q8IVU1	814 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	CMIP	Q8IY22	773 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	NOX5	Q96PH1	765 aa		4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	MBD1	Q9UIS9	605 aa	Predicted RBP	4.91	□□□□□ -1.62
HNRNPU-215	ENST00000638589	TLDC2	A0PJX2	215 aa		4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	CCDC66	A2RUB6	948 aa		4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	PPM1G	O15355	546 aa	Predicted RBP	4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	NPHS1	O60500	1241 aa		4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	CDC45	O75419	566 aa		4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	GLRX3	O76003	335 aa	Known RBP	4.9	□□□□□ -1.63
HNRNPU-215	ENST00000638589	ID4	P47928	161 aa		4.9	□□□□□ -1.63

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