RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 GUCY2DQ02846 1103 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 TAF11Q15544 211 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 TBC1D1Q86TI0 1168 aaPredicted RBP13.21□□□□□ -0.3
CAPN3-221ENST00000638141 MIPOL1Q8TD10 442 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 MKL1Q969V6 931 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 HINFPQ9BQA5 517 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 CNOT8Q9UFF9 292 aaKnown RBP13.21□□□□□ -0.3
CAPN3-221ENST00000638141 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 FOXP2O15409 715 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 SRGNP10124 158 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 TMOD1P28289 359 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 RCAN1P53805 252 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 NCALDP61601 193 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 CFAP61Q8NHU2 1237 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 APPBP2Q92624 585 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 TRIM4Q9C037 500 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 ATRNO75882 1429 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 LRP6O75581 1613 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 LIFRP42702 1097 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 RANBP1P43487 201 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 GALNTL6Q49A17 601 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
CAPN3-221ENST00000638141 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
CAPN3-221ENST00000638141 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-221ENST00000638141 LTN1O94822 1766 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-221ENST00000638141 EVI5O60447 810 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 PSMC4P43686 418 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 SFSWAPQ12872 951 aaKnown RBP13.19□□□□□ -0.3
CAPN3-221ENST00000638141 PDIA6Q15084 440 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 ZNF658Q5TYW1 1059 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-221ENST00000638141 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 IFT43Q96FT9 208 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
CAPN3-221ENST00000638141 RANBP6O60518 1105 aaKnown RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ATP6V1C1P21283 382 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CDC25CP30307 473 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CTDSPL2Q05D32 466 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 UAP1Q16222 522 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 IFT81Q8WYA0 676 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 KRT23Q9C075 422 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 MYH1P12882 1939 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CES2O00748 559 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ZNF263O14978 683 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CIAO1O76071 339 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 GCP02774 474 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 RARAP10276 462 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ABCD1P33897 745 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CD151P48509 253 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 GNAQP50148 359 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ATP11AP98196 1134 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 NELFBQ8WX92 580 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 RAB17Q9H0T7 212 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 PCDHA13Q9Y5I0 950 aa13.18□□□□□ -0.3
CAPN3-221ENST00000638141 CREB3O43889 395 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 KIF4AO95239 1232 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 GSTA2P09210 222 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 GNAZP19086 355 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ECHS1P30084 290 aa13.17□□□□□ -0.3
CAPN3-221ENST00000638141 CTNNA1P35221 906 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
CAPN3-221ENST00000638141 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms