RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 CRHR2Q13324 411 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 FASTKD5Q7L8L6 764 aaKnown RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 SYTL5Q8TDW5 730 aaPredicted RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 DDX25Q9UHL0 483 aaKnown RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 WDR81Q562E7 1941 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 CCL15-CCL14A0A0B4J2E2 113 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 PP2D1A8MPX8 630 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 HERVK_113P62684 666 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 CALCRLQ16602 461 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 CCL15Q16663 113 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 DTHD1Q6ZMT9 781 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 MCF2L2Q86YR7 1114 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 IGSF22Q8N9C0 903 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
CTSD-211ENST00000637387 NAP1L4Q99733 375 aaKnown RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 CTDP1Q9Y5B0 961 aaPredicted RBP17.32■□□□□ 0.36
CTSD-211ENST00000637387 DOCK5Q9H7D0 1870 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 ACTN4O43707 911 aaKnown RBP17.31■□□□□ 0.36
CTSD-211ENST00000637387 UBXN2AP68543 259 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
CTSD-211ENST00000637387 Q4G0T1 1027 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 IL31RAQ8NI17 732 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
CTSD-211ENST00000637387 LETM1O95202 739 aaPredicted RBP17.3■□□□□ 0.36
CTSD-211ENST00000637387 CDC25AP30304 524 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 STAT3P40763 770 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTSD-211ENST00000637387 E2F4Q16254 413 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 TKFCQ3LXA3 575 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
CTSD-211ENST00000637387 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 CKAP2LQ8IYA6 745 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 MB21D1Q8N884 522 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 CYP2W1Q8TAV3 490 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 GJA10Q969M2 543 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 TXNRD2Q9NNW7 524 aa17.3■□□□□ 0.36
CTSD-211ENST00000637387 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
CTSD-211ENST00000637387 RNF207Q6ZRF8 634 aa17.29■□□□□ 0.36
CTSD-211ENST00000637387 RIOX2Q8IUF8 465 aa17.29■□□□□ 0.36
CTSD-211ENST00000637387 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
CTSD-211ENST00000637387 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
CTSD-211ENST00000637387 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
CTSD-211ENST00000637387 ACAD9Q9H845 621 aa17.29■□□□□ 0.36
CTSD-211ENST00000637387 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
CTSD-211ENST00000637387 CTAGE5O15320 804 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 CETPP11597 493 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 TXKP42681 527 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 BAATQ14032 418 aaPredicted RBP17.28■□□□□ 0.36
CTSD-211ENST00000637387 NSMFQ6X4W1 530 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 PDILTQ8N807 584 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 ERCC4Q92889 916 aaPredicted RBP17.28■□□□□ 0.36
CTSD-211ENST00000637387 TAAR1Q96RJ0 339 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 SPATC1LQ9H0A9 340 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
CTSD-211ENST00000637387 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 SERTAD1Q9UHV2 236 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 POTEMA6NI47 508 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 BTBD19C9JJ37 291 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 TECP42680 631 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 SPIRE1Q08AE8 756 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 PABPC4Q13310 644 aaKnown RBP eCLIP17.28■□□□□ 0.369e-14■■■□□ 15.1
CTSD-211ENST00000637387 PLS1Q14651 629 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 PRR16Q569H4 304 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 AK8Q96MA6 479 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 PANK2Q9BZ23 570 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 CYP39A1Q9NYL5 469 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 SLC45A1Q9Y2W3 748 aa17.28■□□□□ 0.36
CTSD-211ENST00000637387 MCM3APO60318 1980 aa17.27■□□□□ 0.36
CTSD-211ENST00000637387 TBX3O15119 743 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 MSH4O15457 936 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 CAP1Q01518 475 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 SP3Q02447 781 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 TAF1CQ15572 869 aaPredicted RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.35
CTSD-211ENST00000637387 ELOA2Q8IYF1 753 aaPredicted RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 CHST13Q8NET6 341 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 ERO1AQ96HE7 468 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 MAF1Q9H063 256 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.35
CTSD-211ENST00000637387 ZFYVE28Q9HCC9 887 aa17.27■□□□□ 0.35
CTSD-211ENST00000637387 PXMP2Q9NR77 195 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms