RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CCDC194A0A1B0GVG4 234 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 EIF3JO75822 258 aaKnown RBP18.26■□□□□ 0.51
CLN6-216ENST00000636876 CYBAP13498 195 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
CLN6-216ENST00000636876 SYT1P21579 422 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 ARHGAP4P98171 946 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.518e-7■■■□□ 15.9
CLN6-216ENST00000636876 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 FOXP1Q9H334 677 aaPredicted RBP18.26■□□□□ 0.51
CLN6-216ENST00000636876 ABHD16BQ9H3Z7 469 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
CLN6-216ENST00000636876 MYH7BA7E2Y1 1941 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
CLN6-216ENST00000636876 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 PRAMEF19Q5SWL8 479 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
CLN6-216ENST00000636876 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
CLN6-216ENST00000636876 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
CLN6-216ENST00000636876 VPS37CA5D8V6 355 aaPredicted RBP18.24■□□□□ 0.51
CLN6-216ENST00000636876 STAM2O75886 525 aa18.24■□□□□ 0.51
CLN6-216ENST00000636876 CYP3A4P08684 503 aa18.24■□□□□ 0.51
CLN6-216ENST00000636876 ZNF865P0CJ78 1059 aaPredicted RBP18.24■□□□□ 0.51
CLN6-216ENST00000636876 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLN6-216ENST00000636876 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
CLN6-216ENST00000636876 EARS2Q5JPH6 523 aaKnown RBP18.24■□□□□ 0.51
CLN6-216ENST00000636876 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
CLN6-216ENST00000636876 PIK3AP1Q6ZUJ8 805 aa18.24■□□□□ 0.51
CLN6-216ENST00000636876 TBCKQ8TEA7 893 aa18.24■□□□□ 0.51
CLN6-216ENST00000636876 FAM205CA6NFA0 338 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 RGS20O76081 388 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 INF2Q27J81 1249 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 ZNF333Q96JL9 665 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 ZFP91Q96JP5 570 aaPredicted RBP18.23■□□□□ 0.51
CLN6-216ENST00000636876 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
CLN6-216ENST00000636876 UBIAD1Q9Y5Z9 338 aa18.23■□□□□ 0.51
CLN6-216ENST00000636876 KIAA0100Q14667 2235 aaKnown RBP18.22■□□□□ 0.51
CLN6-216ENST00000636876 RBM47A0AV96 593 aaKnown RBP18.22■□□□□ 0.51
CLN6-216ENST00000636876 STX6O43752 255 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 EDIL3O43854 480 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 CCND3P30281 292 aaPredicted RBP18.22■□□□□ 0.51
CLN6-216ENST00000636876 USP11P51784 963 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 HMX1Q9NP08 348 aaPredicted RBP18.22■□□□□ 0.51
CLN6-216ENST00000636876 PDGFCQ9NRA1 345 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 RTEL1Q9NZ71 1219 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
CLN6-216ENST00000636876 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 SEPT4O43236 478 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
CLN6-216ENST00000636876 ITGB5P18084 799 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 CIITAP33076 1130 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 ZNF76P36508 570 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 MTFR1Q15390 333 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 CEP55Q53EZ4 464 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 NEK8Q86SG6 692 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 MXRA8Q9BRK3 442 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 UNC93B1Q9H1C4 597 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
CLN6-216ENST00000636876 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.51
CLN6-216ENST00000636876 MEIS1O00470 390 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 CCL5P13501 91 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 AKR1A1P14550 325 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 CNGA1P29973 690 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 ADCYAP1R1P41586 468 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 IQSEC1Q6DN90 963 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 MOXD1Q6UVY6 613 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 NIPA1Q7RTP0 329 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 NLRX1Q86UT6 975 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 GPRASP2Q96D09 838 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.2■□□□□ 0.54e-8■■■■□ 25.2
CLN6-216ENST00000636876 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
CLN6-216ENST00000636876 CYP3A7-CYP3A51PA0A087WV96 503 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 FAM86B1E9PN63 330 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 FIBPO43427 364 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 FAM86B2P0C5J1 330 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 CYP3A7P24462 503 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 ICAM3P32942 547 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 SEMA3FQ13275 785 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 LETM2Q2VYF4 491 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 FERMT3Q86UX7 667 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
CLN6-216ENST00000636876 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
CLN6-216ENST00000636876 IGLV3-22A0A075B6J6 115 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
CLN6-216ENST00000636876 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 ADCY6O43306 1168 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 ARIH2O95376 493 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 TDP2O95551 362 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms