RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 PFASO15067 1338 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
CLN5-213ENST00000636681 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
CLN5-213ENST00000636681 MAPK4P31152 587 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 STK38Q15208 465 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 SPATA32Q96LK8 384 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 RCOR1Q9UKL0 485 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 GJD2Q9UKL4 321 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
CLN5-213ENST00000636681 GPR25O00155 361 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 CYP3A4P08684 503 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 ZNF76P36508 570 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 SP3Q02447 781 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 HAS1Q92839 578 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 SPTLC2O15270 562 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 MSH4O15457 936 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 NEMFO60524 1076 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 ATP9AO75110 1047 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 CDC25AP30304 524 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 MCM4P33991 863 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 COPB2P35606 906 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 USP11P51784 963 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 PCNX4Q63HM2 1172 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 USP49Q70CQ1 688 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 USP6NLQ92738 828 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 FBXO2Q9UK22 296 aaPredicted RBP12.1□□□□□ -0.47
CLN5-213ENST00000636681 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
CLN5-213ENST00000636681 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 PP2D1A8MPX8 630 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 STRNO43815 780 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 CYP3A7P24462 503 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 CIITAP33076 1130 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 TXKP42681 527 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 TRAPPC10P48553 1259 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 ATP2C1P98194 919 aaPredicted RBP12.09□□□□□ -0.47
CLN5-213ENST00000636681 PRKCZQ05513 592 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
CLN5-213ENST00000636681 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 PLA2G4DQ86XP0 818 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
CLN5-213ENST00000636681 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 MTMR9Q96QG7 549 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
CLN5-213ENST00000636681 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 MEIS1O00470 390 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 YEATS4O95619 227 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 EDNRBP24530 442 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 CCND2P30279 289 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 ME1P48163 572 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 TRIM32Q13049 653 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
CLN5-213ENST00000636681 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 ARMCX2Q7L311 632 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
CLN5-213ENST00000636681 POTEMA6NI47 508 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 DDX39AO00148 427 aaKnown RBP12.07□□□□□ -0.48
CLN5-213ENST00000636681 ARIH2O95376 493 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 SNAI1O95863 264 aaPredicted RBP12.07□□□□□ -0.48
CLN5-213ENST00000636681 CYP2C19P33261 490 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 FLT3LGP49771 235 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 SP2Q02086 613 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 PDE4DQ08499 809 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 ITGB3BPQ13352 177 aaPredicted RBP12.07□□□□□ -0.48
CLN5-213ENST00000636681 CALCRLQ16602 461 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 Q4G0T1 1027 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 ABRAQ8N0Z2 381 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 GBP4Q96PP9 640 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 NUDT12Q9BQG2 462 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
CLN5-213ENST00000636681 CSRNP2Q9H175 543 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 GOLPH3LQ9H4A5 285 aa12.07□□□□□ -0.48
CLN5-213ENST00000636681 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms