RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 NIPA1Q7RTP0 329 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 USP28Q96RU2 1077 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 POLR3EQ9NVU0 708 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 SRRDQ9UH36 339 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 CEP131Q9UPN4 1083 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 UBIAD1Q9Y5Z9 338 aa15.19■□□□□ 0.02
CHRNA4-216ENST00000636652 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 FAM86B1E9PN63 330 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 NEMFO60524 1076 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 FAM86B2P0C5J1 330 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 CYP2B6P20813 491 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 NASPP49321 788 aaPredicted RBP15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 FLT3LGP49771 235 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 PRKCZQ05513 592 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 IRF5Q13568 498 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 NBR1Q14596 966 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 Q4G0T1 1027 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 OLFML2BQ68BL8 750 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 ARMCX2Q7L311 632 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 INPP4AQ96PE3 977 aaPredicted RBP15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 MXRA8Q9BRK3 442 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 JADE2Q9NQC1 790 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 DDX25Q9UHL0 483 aaKnown RBP15.18■□□□□ 0.02
CHRNA4-216ENST00000636652 LCTP09848 1927 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 MEIS1O00470 390 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 YEATS4O95619 227 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 ITGB5P18084 799 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 MCM7P33993 719 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 SF3A1Q15459 793 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 ZNF174Q15697 407 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 CLEC17AQ6ZS10 378 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 NLRX1Q86UT6 975 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 TRMT44Q8IYL2 757 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 LENG9Q96B70 501 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 GPRASP2Q96D09 838 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 TINF2Q9BSI4 451 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 GABRQQ9UN88 632 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 MORC2Q9Y6X9 1032 aaPredicted RBP15.17■□□□□ 0.02
CHRNA4-216ENST00000636652 LAD1O00515 517 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 SLC37A4O43826 429 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 IGHA2P01877 340 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 PTPAQ15257 358 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 PRR16Q569H4 304 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-216ENST00000636652 MGAMO43451 1857 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 TBX3O15119 743 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 FOXN1O15353 648 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 MAFGO15525 162 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 FIBPO43427 364 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 OR52Z1P0C646 297 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CTCFP49711 727 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 ATP2C1P98194 919 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 PTGDRQ13258 359 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 MTMR1Q13613 665 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 STK38Q15208 465 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CALCRLQ16602 461 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 C4orf32Q8N8J7 132 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 LINC00301Q8NCQ3 95 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 GBP4Q96PP9 640 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 KCNMB3Q9NPA1 279 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 FLRT1Q9NZU1 646 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 ZSWIM8A7E2V4 1837 aa15.15■□□□□ 0.02
CHRNA4-216ENST00000636652 RGS20O76081 388 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 SNAI1O95863 264 aaPredicted RBP15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 ICAM3P32942 547 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 PRPHP41219 470 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 CCL14Q16627 93 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 CSPP1Q1MSJ5 1256 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 ARL6IP4Q66PJ3 421 aaKnown RBP15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
CHRNA4-216ENST00000636652 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms