RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, human

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-223	ENST00000636616	PRAMEF13	Q5VWM6	474 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	ZAR1	Q86SH2	424 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	MORC1	Q86VD1	984 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	SHISA5	Q8N114	240 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	AHI1	Q8N157	1196 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	FAM13C	Q8NE31	585 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	USP33	Q8TEY7	942 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	DBNDD2	Q9BQY9	259 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	PHAX	Q9H814	394 aa	Known RBP	6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	TRIM39	Q9HCM9	518 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	KLHL3	Q9UH77	587 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	SPEF1	Q9Y4P9	236 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	SCIN	Q9Y6U3	715 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	NPTXR	O95502	500 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	MAN1A1	P33908	653 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	YARS	P54577	528 aa	Known RBP	6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	PICALM	Q13492	652 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	MFSD2A	Q8NA29	543 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	GIMAP7	Q8NHV1	300 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	STRBP	Q96SI9	672 aa	Known RBP	6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	DPH2	Q9BQC3	489 aa	Predicted RBP	6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	SEMA6B	Q9H3T3	888 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	GMIP	Q9P107	970 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	IP6K2	Q9UHH9	426 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	AGL	P35573	1532 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	DUOX2	Q9NRD8	1548 aa		6.17	□□□□□ -1.42
EFHC1-223	ENST00000636616	ERBIN	Q96RT1	1412 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	KIF15	Q9NS87	1388 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	TRAV20	A0A0B4J274	112 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	SCO2	A0A1W2PP80	73 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	FBXO21	O94952	628 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	F13B	P05160	661 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	FAM163B	P0C2L3	166 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	TRAPPC10	P48553	1259 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	OGFOD3	Q6PK18	319 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	SLC51A	Q86UW1	340 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	SLFN12	Q8IYM2	578 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	FBXL6	Q8N531	539 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	TOP6BL	Q8N6T0	577 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	PAGR1	Q9BTK6	254 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	LUC7L	Q9NQ29	371 aa	Known RBP	6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	PRDM11	Q9NQV5	511 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	RRP7BP	Q9NSQ0	103 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	LUZP4	Q9P127	313 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	PPP2R3B	Q9Y5P8	575 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	A2M	P01023	1474 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	ADGB	Q8N7X0	1667 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	NAIP	Q13075	1403 aa		6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.16	□□□□□ -1.42
EFHC1-223	ENST00000636616	BCORL1	Q5H9F3	1711 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	NEMP1	O14524	444 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	ZNF500	O60304	480 aa	Predicted RBP	6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	LEFTY1	O75610	366 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	SLITRK5	O94991	958 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	FAM87A	P0C7U9	286 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	ID4	P47928	161 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	ZNF460	Q14592	562 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	TRIM61	Q5EBN2	209 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	INTS3	Q68E01	1043 aa	Known RBP	6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	OVOS1	Q6IE37	1185 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	SCUBE1	Q8IWY4	988 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	SLC7A14	Q8TBB6	771 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	SHKBP1	Q8TBC3	707 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	XAGE3	Q8WTP9	111 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	RUNDC1	Q96C34	613 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	ATG4C	Q96DT6	458 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	DUSP23	Q9BVJ7	150 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	INO80B	Q9C086	356 aa	Predicted RBP	6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	TNPO3	Q9Y5L0	923 aa	Known RBP	6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	ANKRD50	Q9ULJ7	1429 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	YEATS2	Q9ULM3	1422 aa		6.15	□□□□□ -1.42
EFHC1-223	ENST00000636616	DIP2C	Q9Y2E4	1556 aa		6.15	□□□□□ -1.43
EFHC1-223	ENST00000636616	ARHGEF40	Q8TER5	1519 aa		6.15	□□□□□ -1.43
EFHC1-223	ENST00000636616	ANO9	A1A5B4	782 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	RASSF10	A6NK89	507 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	FAM170B	A6NMN3	283 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	WDR64	B1ANS9	1081 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	CCER2	I3L3R5	266 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	APAF1	O14727	1248 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	KPNA6	O60684	536 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	MYL3	P08590	195 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	NME1	P15531	152 aa	Known RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	NEK4	P51957	841 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	SIM2	Q14190	667 aa	Predicted RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	PRSS36	Q5K4E3	855 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	CDCP2	Q5VXM1	449 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	SLC9A7	Q96T83	725 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	TTC1	Q99614	292 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	MIPEP	Q99797	713 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	AARSD1	Q9BTE6	412 aa	Known RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	KRTAP4-5	Q9BYR2	181 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	ZHX3	Q9H4I2	956 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	CNNM2	Q9H8M5	875 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	AS3MT	Q9HBK9	375 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	NGRN	Q9NPE2	291 aa	Known RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	CRTAC1	Q9NQ79	661 aa		6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	SUCO	Q9UBS9	1254 aa	Known RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	PUF60	Q9UHX1	559 aa	Known RBP	6.14	□□□□□ -1.43
EFHC1-223	ENST00000636616	LUC7L2	Q9Y383	392 aa	Known RBP	6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms