RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 COL9A3Q14050 684 aaPredicted RBP21.29■■□□□ 1
CLN6-214ENST00000636314 OTOP2Q7RTS6 562 aa21.29■■□□□ 1
CLN6-214ENST00000636314 SLC43A3Q8NBI5 491 aa21.29■■□□□ 1
CLN6-214ENST00000636314 SCFD2Q8WU76 684 aa21.29■■□□□ 1
CLN6-214ENST00000636314 ATXN2LQ8WWM7 1075 aaKnown RBP21.29■■□□□ 1
CLN6-214ENST00000636314 TAAR1Q96RJ0 339 aa21.29■■□□□ 1
CLN6-214ENST00000636314 RMDN3Q96TC7 470 aa21.29■■□□□ 1
CLN6-214ENST00000636314 SLC28A3Q9HAS3 691 aa21.29■■□□□ 1
CLN6-214ENST00000636314 KIAA1217Q5T5P2 1943 aa21.29■■□□□ 1
CLN6-214ENST00000636314 PNMA6FA0A0J9YX94 578 aa21.28■■□□□ 1
CLN6-214ENST00000636314 OPLAHO14841 1288 aa21.28■■□□□ 1
CLN6-214ENST00000636314 LIFRP42702 1097 aa21.28■■□□□ 1
CLN6-214ENST00000636314 HSD17B4P51659 736 aa21.28■■□□□ 1
CLN6-214ENST00000636314 ADGRE1Q14246 886 aa21.28■■□□□ 1
CLN6-214ENST00000636314 ARHGEF16Q5VV41 709 aa21.28■■□□□ 1
CLN6-214ENST00000636314 OR6J1Q8NGC5 347 aa21.28■■□□□ 1
CLN6-214ENST00000636314 NEK1Q96PY6 1258 aa21.28■■□□□ 1
CLN6-214ENST00000636314 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
CLN6-214ENST00000636314 TRPV6Q9H1D0 765 aa21.28■■□□□ 1
CLN6-214ENST00000636314 CHD7Q9P2D1 2997 aa21.27■■□□□ 1
CLN6-214ENST00000636314 NKRFO15226 690 aaKnown RBP eCLIP21.27■■□□□ 1
CLN6-214ENST00000636314 CALM1P0DP23 149 aa21.27■■□□□ 1
CLN6-214ENST00000636314 CALM2P0DP24 149 aa21.27■■□□□ 1
CLN6-214ENST00000636314 CALM3P0DP25 149 aa21.27■■□□□ 1
CLN6-214ENST00000636314 EIF2AK2P19525 551 aaKnown RBP21.27■■□□□ 1
CLN6-214ENST00000636314 GHRHRQ02643 423 aa21.27■■□□□ 1
CLN6-214ENST00000636314 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
CLN6-214ENST00000636314 IWS1Q96ST2 819 aa21.27■■□□□ 1
CLN6-214ENST00000636314 SPZ1Q9BXG8 430 aa21.27■■□□□ 1
CLN6-214ENST00000636314 MAP3K20Q9NYL2 800 aaKnown RBP21.27■■□□□ 1
CLN6-214ENST00000636314 YBX2Q9Y2T7 364 aaKnown RBP21.27■■□□□ 1
CLN6-214ENST00000636314 SLC12A7Q9Y666 1083 aa21.27■■□□□ 1
CLN6-214ENST00000636314 GRIN2DO15399 1336 aa21.27■□□□□ 0.99
CLN6-214ENST00000636314 TCF20Q9UGU0 1960 aaKnown RBP21.27■□□□□ 0.99
CLN6-214ENST00000636314 SCN5AQ14524 2016 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 REV3LO60673 3130 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 B4GALT4O60513 344 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 RXRAP19793 462 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 COL9A1P20849 921 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 GNAQP50148 359 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 CPT1AP50416 773 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 PSMC6P62333 389 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 KRT32Q14532 448 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 TTLL4Q14679 1199 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 STXBP2Q15833 593 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 SAMD3Q8N6K7 520 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 IL27Q8NEV9 243 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 RRP36Q96EU6 259 aaKnown RBP21.26■□□□□ 0.99
CLN6-214ENST00000636314 ASB2Q96Q27 587 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 LZTS2Q9BRK4 669 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 NOC4LQ9BVI4 516 aaKnown RBP21.26■□□□□ 0.99
CLN6-214ENST00000636314 SEZ6LQ9BYH1 1024 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 PXMP2Q9NR77 195 aa21.26■□□□□ 0.99
CLN6-214ENST00000636314 SEC63Q9UGP8 760 aaKnown RBP21.26■□□□□ 0.99
CLN6-214ENST00000636314 ZBBXA8MT70 800 aa21.25■□□□□ 0.99
CLN6-214ENST00000636314 TXNP10599 105 aaKnown RBP21.25■□□□□ 0.99
CLN6-214ENST00000636314 HOXA13P31271 388 aaPredicted RBP21.25■□□□□ 0.99
CLN6-214ENST00000636314 RABGGTBP53611 331 aa21.25■□□□□ 0.99
CLN6-214ENST00000636314 MRPS5P82675 430 aaKnown RBP21.25■□□□□ 0.99
CLN6-214ENST00000636314 BRDTQ58F21 947 aaPredicted RBP21.25■□□□□ 0.99
CLN6-214ENST00000636314 RPUSD2Q8IZ73 545 aaKnown RBP21.25■□□□□ 0.99
CLN6-214ENST00000636314 ADAMTS19Q8TE59 1207 aa21.25■□□□□ 0.99
CLN6-214ENST00000636314 WNT8AQ9H1J5 351 aa21.25■□□□□ 0.99
CLN6-214ENST00000636314 GCOM1H8Y6P7 765 aaPredicted RBP21.24■□□□□ 0.99
CLN6-214ENST00000636314 PLEKHA8P1O95397 391 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 POLR2MP0CAP2 368 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 TSGA10IPQ3SY00 556 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SEPT14Q6ZU15 432 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SGMS1Q86VZ5 419 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 MICU3Q86XE3 530 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 RAB11FIP4Q86YS3 637 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 RASEFQ8IZ41 740 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 MICALL1Q8N3F8 863 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SCLYQ96I15 445 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 POLR3EQ9NVU0 708 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 SLC4A7Q9Y6M7 1214 aa21.24■□□□□ 0.99
CLN6-214ENST00000636314 ARIH2O95376 493 aa21.23■□□□□ 0.99
CLN6-214ENST00000636314 NR3C2P08235 984 aa21.23■□□□□ 0.99
CLN6-214ENST00000636314 ADCK5Q3MIX3 580 aa21.23■□□□□ 0.99
CLN6-214ENST00000636314 PPP2R2DQ66LE6 453 aa21.23■□□□□ 0.99
CLN6-214ENST00000636314 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
CLN6-214ENST00000636314 COPS5Q92905 334 aa21.23■□□□□ 0.99
CLN6-214ENST00000636314 UHRF1Q96T88 793 aaPredicted RBP21.23■□□□□ 0.99
CLN6-214ENST00000636314 EIF3JO75822 258 aaKnown RBP21.22■□□□□ 0.99
CLN6-214ENST00000636314 MYL3P08590 195 aa21.22■□□□□ 0.99
CLN6-214ENST00000636314 MYOGP15173 224 aa21.22■□□□□ 0.99
CLN6-214ENST00000636314 SRBD1Q8N5C6 995 aaKnown RBP21.22■□□□□ 0.99
CLN6-214ENST00000636314 TCEANC2Q96MN5 208 aa21.22■□□□□ 0.99
CLN6-214ENST00000636314 PDCD2LQ9BRP1 358 aa21.22■□□□□ 0.99
CLN6-214ENST00000636314 TSPYL2Q9H2G4 693 aaPredicted RBP21.22■□□□□ 0.99
CLN6-214ENST00000636314 REC8O95072 547 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 HMGB1P09429 215 aaKnown RBP21.21■□□□□ 0.99
CLN6-214ENST00000636314 MYCLP12524 364 aaPredicted RBP21.21■□□□□ 0.99
CLN6-214ENST00000636314 PURAQ00577 322 aaKnown RBP21.21■□□□□ 0.99
CLN6-214ENST00000636314 CCDC62Q6P9F0 684 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 CMTR1Q8N1G2 835 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms