RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 STXBP2Q15833 593 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 LY6KQ17RY6 165 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 BRDTQ58F21 947 aaPredicted RBP8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 NFRKBQ6P4R8 1299 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 TIFAQ96CG3 184 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 PBX4Q9BYU1 374 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 RIOX1Q9H6W3 641 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 PXMP2Q9NR77 195 aa8.52□□□□□ -1.05
CACNA1A-222ENST00000636022 IFIT3O14879 490 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 CFBP00751 764 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 FGBP02675 491 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 NR3C2P08235 984 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 SUPT20HL2P0C7V6 817 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 EIF2AK2P19525 551 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 ANTXR2P58335 489 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 PTPN11Q06124 597 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 ARHGEF16Q5VV41 709 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 SEPT14Q6ZU15 432 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 CHST3Q7LGC8 479 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 OTOP2Q7RTS6 562 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 MB21D2Q8IYB1 491 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 MAFAQ8NHW3 353 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 IGDCC4Q8TDY8 1250 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 PPP1R13LQ8WUF5 828 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 AFG1LQ8WV93 481 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 KAT2BQ92831 832 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 EMID1Q96A84 441 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 SCLYQ96I15 445 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 CTAGE1Q96RT6 745 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 ZNF576Q9H609 170 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 GPHNQ9NQX3 736 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 MAP3K20Q9NYL2 800 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 DDX41Q9UJV9 622 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 PCDHA1Q9Y5I3 950 aa8.51□□□□□ -1.05
CACNA1A-222ENST00000636022 GH1P01241 217 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 MMP3P08254 477 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 FOSL2P15408 326 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 WTAPQ15007 396 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 SESTD1Q86VW0 696 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 RPUSD2Q8IZ73 545 aaKnown RBP8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 SAMD3Q8N6K7 520 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 NCOA7Q8NI08 942 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 PIGSQ96S52 555 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 PDCD2LQ9BRP1 358 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 TANC1Q9C0D5 1861 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 LY9Q9HBG7 655 aa8.5□□□□□ -1.05
CACNA1A-222ENST00000636022 PNMA6FA0A0J9YX94 578 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 ERICH2A1L162 156 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 PFKMP08237 780 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 HOXA13P31271 388 aaPredicted RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 PGM5Q15124 567 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 DGKDQ16760 1214 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 FAM47CQ5HY64 1035 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 IL31RAQ8NI17 732 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 PPTC7Q8NI37 304 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 SP7Q8TDD2 431 aaPredicted RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 MAP3K14Q99558 947 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 MTA3Q9BTC8 594 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 LSG1Q9H089 658 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 MTIF3Q9H2K0 278 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 YBX2Q9Y2T7 364 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 RBM8AQ9Y5S9 174 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 BRWD1Q9NSI6 2320 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 FRMPD4Q14CM0 1322 aa8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-222ENST00000636022 GCOM1H8Y6P7 765 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 HAS3O00219 553 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 F2P00734 622 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 POLR2MP0CAP2 368 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 MYCLP12524 364 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 CASTP20810 708 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 RFC2P35250 354 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 RABGGTBP53611 331 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 SP2Q02086 613 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 TRAF1Q13077 416 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 LAMC2Q13753 1193 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 GPNMBQ14956 572 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 RAB30Q15771 203 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 GDF6Q6KF10 455 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 USP38Q8NB14 1042 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 DHX38Q92620 1227 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 GTF2IRD1Q9UHL9 959 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 MSRAQ9UJ68 235 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms