RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TEX2Q8IWB9 1127 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 DNAJC10Q8IXB1 793 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 REXO1Q8N1G1 1221 aaKnown RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 NEU4Q8WWR8 484 aaPredicted RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 NAF1Q96HR8 494 aaKnown RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 YTHDC1Q96MU7 727 aaKnown RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 LRRC37BQ96QE4 947 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 ADOQ96SZ5 270 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 MEGF9Q9H1U4 602 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 SEMA4AQ9H3S1 761 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 FTSJ1Q9UET6 329 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 ADAMTS1Q9UHI8 967 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 ZFR2Q9UPR6 939 aaKnown RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 A0A087X1B8 175 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 C7orf72A4D263 438 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 C2orf71A6NGG8 1288 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 SGSM2O43147 1006 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 FOXS1O43638 330 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 NARSO43776 548 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 THBDP07204 575 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 PDIA4P13667 645 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 PAMP19021 973 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 MCM7P33993 719 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 NKX3-2P78367 333 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 PTH1RQ03431 593 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 DPTQ07507 201 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 TCEAL1Q15170 157 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 LSM12Q3MHD2 195 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 USP39Q53GS9 565 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 MIIPQ5JXC2 388 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 FBXW10Q5XX13 1052 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 MBLAC2Q68D91 279 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 TCTN3Q6NUS6 607 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 PKN3Q6P5Z2 889 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 TRMT10BQ6PF06 316 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 MIB1Q86YT6 1006 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 FAM126BQ8IXS8 530 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 GIMAP8Q8ND71 665 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 PLEKHO2Q8TD55 490 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 SMARCC1Q92922 1105 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 EXTL1Q92935 676 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 NKD1Q969G9 470 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 RNF34Q969K3 372 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 ZG16BQ96DA0 208 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF503Q96F45 646 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 CLIC6Q96NY7 704 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 CRAMP1Q96RY5 1269 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 BARX1Q9HBU1 254 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 KCNQ5Q9NR82 932 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 CLEC1BQ9P126 229 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 TESMINQ9Y4I5 508 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 BACE2Q9Y5Z0 518 aa1.99□□□□□ -2.09
SMARCB1-209ENST00000635578 C22orf46C9J442 243 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 CBFA2T2O43439 604 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 PLS3P13797 630 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 FPR2P25090 351 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 INHBCP55103 352 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 AMPD2Q01433 879 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 NFATC3Q12968 1075 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 CR1LQ2VPA4 569 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 KRTAP15-1Q3LI76 137 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 ANKRD39Q53RE8 183 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 PHF19Q5T6S3 580 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 TMC5Q6UXY8 1006 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 UNC5AQ6ZN44 842 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 RUFY4Q6ZNE9 571 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 GPR155Q7Z3F1 870 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 ADAT2Q7Z6V5 191 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 ZCCHC14Q8WYQ9 949 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 SEC14L1Q92503 715 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 DPF3Q92784 378 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 FGD4Q96M96 766 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 FERD3LQ96RJ6 166 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 LMF1Q96S06 567 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 HAUS7Q99871 368 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 GBP3Q9H0R5 595 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 WHRNQ9P202 907 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 GGT7Q9UJ14 662 aa1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 DIS3Q9Y2L1 958 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-209ENST00000635578 NISCHQ9Y2I1 1504 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 TRBV23OR9-2A0A075B6M9 112 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 CNOT4O95628 575 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 EPHX1P07099 455 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 C1SP09871 688 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 TAGLNQ01995 201 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 GNPTABQ3T906 1256 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 INTS3Q68E01 1043 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 HEATR6Q6AI08 1181 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 DPY19L2P1Q6NXN4 242 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 RALYLQ86SE5 291 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 KLHL36Q8N4N3 616 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 NUDT10Q8NFP7 164 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 NUDT11Q96G61 164 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 GPRC5CQ9NQ84 441 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 RBPJLQ9UBG7 517 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 CGGBP1Q9UFW8 167 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF214Q9UL59 606 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNRF3Q9ULT6 936 aa1.97□□□□□ -2.09
SMARCB1-209ENST00000635578 PCDHB10Q9UN67 800 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms