RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 USP17L24Q0WX57 530 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 SHHQ15465 462 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 FAM83BQ5T0W9 1011 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 MFSD14CQ5VZR4 134 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 CCAR1Q8IX12 1150 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 SPICE1Q8N0Z3 855 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 BICD2Q8TD16 824 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 CDX2Q99626 313 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 AMNQ9BXJ7 453 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
SMARCA2-228ENST00000634772 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 TRAK2O60296 914 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 YEATS4O95619 227 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 CNGA1P29973 690 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 NAPAP54920 295 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 GJC2Q5T442 439 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 ANO1Q5XXA6 986 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 MCTP2Q6DN12 878 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 FBXO11Q86XK2 927 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 LEO1Q8WVC0 666 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 CHAMP1Q96JM3 812 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 USP28Q96RU2 1077 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 MORC2Q9Y6X9 1032 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-228ENST00000634772 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 TOB1P50616 345 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 CCNA1P78396 465 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 NR5A1Q13285 461 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 SLC39A14Q15043 492 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 CDC37Q16543 378 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 WDR78Q5VTH9 848 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 SLC39A5Q6ZMH5 540 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 KRT25Q7Z3Z0 450 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 SPATA32Q96LK8 384 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 SEMA6BQ9H3T3 888 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 RIC8AQ9NPQ8 531 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 ISY1Q9ULR0 285 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 PCDHA6Q9UN73 950 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 PCDHA8Q9Y5H6 950 aa11.15□□□□□ -0.62
SMARCA2-228ENST00000634772 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 FIBPO43427 364 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 MSCO60682 206 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 COBLO75128 1261 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 BMP15O95972 392 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 MBD3O95983 291 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 ADCY7P51828 1080 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 UBE2HP62256 183 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 COG2Q14746 738 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 SNX17Q15036 470 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 LINC00301Q8NCQ3 95 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 BADQ92934 168 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 MOV10L1Q9BXT6 1211 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 MAF1Q9H063 256 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 PDLIM7Q9NR12 457 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
SMARCA2-228ENST00000634772 RLFQ13129 1914 aa11.13□□□□□ -0.63
SMARCA2-228ENST00000634772 SPTLC2O15270 562 aa11.13□□□□□ -0.63
SMARCA2-228ENST00000634772 ZBED4O75132 1171 aa11.13□□□□□ -0.63
SMARCA2-228ENST00000634772 PPP6R2O75170 966 aa11.13□□□□□ -0.63
SMARCA2-228ENST00000634772 ITGB8P26012 769 aa11.13□□□□□ -0.63
SMARCA2-228ENST00000634772 ADORA2AP29274 412 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms