RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	YIPF2	Q9BWQ6	316 aa		6.54	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SEMA6C	Q9H3T2	930 aa		6.54	□□□□□ -1.36
SMARCA2-222	ENST00000634403	GMIP	Q9P107	970 aa		6.54	□□□□□ -1.36
SMARCA2-222	ENST00000634403	ASAP1	Q9ULH1	1129 aa		6.54	□□□□□ -1.36
SMARCA2-222	ENST00000634403	PA2G4	Q9UQ80	394 aa	Known RBP	6.54	□□□□□ -1.36
SMARCA2-222	ENST00000634403	ITGB4	P16144	1822 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403		A0A087WZG4	1122 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SLC22A31	A6NKX4	558 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	UPK3BL1	B0FP48	263 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	UPK3BL2	E5RIL1	263 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	STARD3NL	O95772	234 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	NFIC	P08651	508 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	IFIT2	P09913	472 aa	Known RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	MAP4	P27816	1152 aa	Known RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	DDIT3	P35638	169 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	FOXO4	P98177	505 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SLBP	Q14493	270 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	NFKBIB	Q15653	356 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	TSHZ3	Q63HK5	1081 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	DNAJC10	Q8IXB1	793 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	FAM20C	Q8IXL6	584 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	MRPL41	Q8IXM3	137 aa	Known RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	CNTROB	Q8N137	903 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	OR6P1	Q8NGX9	317 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	RILPL2	Q969X0	211 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	GPATCH3	Q96I76	525 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	ECHDC1	Q9NTX5	307 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	CWC25	Q9NXE8	425 aa	Predicted RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	PCOLCE2	Q9UKZ9	415 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SLIT2	O94813	1529 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	NWD2	Q9ULI1	1742 aa		6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	AFDN	P55196	1824 aa	Known RBP	6.53	□□□□□ -1.36
SMARCA2-222	ENST00000634403	SPATA31A5	Q5VU36	1347 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	SPATA31A7	Q8IWB4	1347 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CHURC1-FNTB	B4DL54	471 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403		K7ELQ4	463 aa	Predicted RBP	6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	SMAD7	O15105	426 aa	Known RBP	6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CYP19A1	P11511	503 aa	Predicted RBP	6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	GATA4	P43694	442 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ANAPC15	P60006	121 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	TCIRG1	Q13488	830 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ARSH	Q5FYA8	562 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PRAMEF13	Q5VWM6	474 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	SLC6A19	Q695T7	634 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	RUFY4	Q6ZNE9	571 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	UBE3B	Q7Z3V4	1068 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	UNC5CL	Q8IV45	518 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	MCAT	Q8IVS2	390 aa	Known RBP	6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	EZH1	Q92800	747 aa	Predicted RBP	6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ATG4C	Q96DT6	458 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	KCNF1	Q9H3M0	494 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CHMP5	Q9NZZ3	219 aa		6.52	□□□□□ -1.37
SMARCA2-222	ENST00000634403	DHX15	O43143	795 aa	Known RBP	6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	SGSM2	O43147	1006 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	DYNC1LI2	O43237	492 aa	Predicted RBP	6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	GDF11	O95390	407 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ITGB2	P05107	769 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	MCC	P23508	829 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CAP2	P40123	477 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	YARS	P54577	528 aa	Known RBP	6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	MAP7	Q14244	749 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	DDB1	Q16531	1140 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PLA2G4E	Q3MJ16	856 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	KIF6	Q6ZMV9	814 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ANKS3	Q6ZW76	656 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ARMCX6	Q7L4S7	300 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	NLRC3	Q7RTR2	1065 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	AACS	Q86V21	672 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	TP53INP1	Q96A56	240 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	EAF2	Q96CJ1	260 aa	Predicted RBP	6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	EVI5L	Q96CN4	794 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PLA2G12B	Q9BX93	195 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CNNM2	Q9H8M5	875 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	GPR108	Q9NPR9	543 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PRKAG3	Q9UGI9	489 aa		6.51	□□□□□ -1.37
SMARCA2-222	ENST00000634403	MAP3K15	Q6ZN16	1313 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	TJP1	Q07157	1748 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	FAM95C	A0A1B0GW59	222 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	ERVV-1	B6SEH8	477 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	HIP1	O00291	1037 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CIAO1	O76071	339 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	LRIG2	O94898	1065 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CST3	P01034	146 aa	Predicted RBP	6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PCCA	P05165	728 aa	Predicted RBP	6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	NME1	P15531	152 aa	Known RBP	6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	RAG1	P15918	1043 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	HSP90AB3P	Q58FF7	597 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	TNNI3K	Q59H18	835 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CDCP2	Q5VXM1	449 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	LMBR1L	Q6UX01	489 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	BEND4	Q6ZU67	534 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	TICAM2	Q86XR7	235 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	CKAP2L	Q8IYA6	745 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	SLFN12	Q8IYM2	578 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	PHACTR4	Q8IZ21	702 aa		6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	MARCH10	Q8NA82	808 aa	Predicted RBP	6.5	□□□□□ -1.37
SMARCA2-222	ENST00000634403	RUFY2	Q8WXA3	655 aa		6.5	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms